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Page 1
A whole-genome shotgun optical map of Yersinia pestis strain KIM.
Zhou S, Deng W, Anantharaman TS, Lim A, Dimalanta ET, Wang J, Wu T, Chunhong T, Creighton R, Kile A, Kvikstad E, Bechner M, Yen G, Garic-Stankovic A, Severin J, Forrest D, Runnheim R, Churas C, Lamers C, Perna NT, Burland V, Blattner FR, Mishra B, Schwartz DC. Zhou S, et al. Among authors: churas c. Appl Environ Microbiol. 2002 Dec;68(12):6321-31. doi: 10.1128/AEM.68.12.6321-6331.2002. Appl Environ Microbiol. 2002. PMID: 12450857 Free PMC article.
Single-molecule approach to bacterial genomic comparisons via optical mapping.
Zhou S, Kile A, Bechner M, Place M, Kvikstad E, Deng W, Wei J, Severin J, Runnheim R, Churas C, Forrest D, Dimalanta ET, Lamers C, Burland V, Blattner FR, Schwartz DC. Zhou S, et al. Among authors: churas c. J Bacteriol. 2004 Nov;186(22):7773-82. doi: 10.1128/JB.186.22.7773-7782.2004. J Bacteriol. 2004. PMID: 15516592 Free PMC article.
Shotgun optical mapping of the entire Leishmania major Friedlin genome.
Zhou S, Kile A, Kvikstad E, Bechner M, Severin J, Forrest D, Runnheim R, Churas C, Anantharaman TS, Myler P, Vogt C, Ivens A, Stuart K, Schwartz DC. Zhou S, et al. Among authors: churas c. Mol Biochem Parasitol. 2004 Nov;138(1):97-106. doi: 10.1016/j.molbiopara.2004.08.002. Mol Biochem Parasitol. 2004. PMID: 15500921
Whole-genome shotgun optical mapping of Rhodospirillum rubrum.
Reslewic S, Zhou S, Place M, Zhang Y, Briska A, Goldstein S, Churas C, Runnheim R, Forrest D, Lim A, Lapidus A, Han CS, Roberts GP, Schwartz DC. Reslewic S, et al. Among authors: churas c. Appl Environ Microbiol. 2005 Sep;71(9):5511-22. doi: 10.1128/AEM.71.9.5511-5522.2005. Appl Environ Microbiol. 2005. PMID: 16151144 Free PMC article.
Validation of rice genome sequence by optical mapping.
Zhou S, Bechner MC, Place M, Churas CP, Pape L, Leong SA, Runnheim R, Forrest DK, Goldstein S, Livny M, Schwartz DC. Zhou S, et al. Among authors: churas cp. BMC Genomics. 2007 Aug 15;8:278. doi: 10.1186/1471-2164-8-278. BMC Genomics. 2007. PMID: 17697381 Free PMC article.
Optical mapping discerns genome wide DNA methylation profiles.
Ananiev GE, Goldstein S, Runnheim R, Forrest DK, Zhou S, Potamousis K, Churas CP, Bergendahl V, Thomson JA, Schwartz DC. Ananiev GE, et al. Among authors: churas cp. BMC Mol Biol. 2008 Jul 30;9:68. doi: 10.1186/1471-2199-9-68. BMC Mol Biol. 2008. PMID: 18667073 Free PMC article.
High-resolution human genome structure by single-molecule analysis.
Teague B, Waterman MS, Goldstein S, Potamousis K, Zhou S, Reslewic S, Sarkar D, Valouev A, Churas C, Kidd JM, Kohn S, Runnheim R, Lamers C, Forrest D, Newton MA, Eichler EE, Kent-First M, Surti U, Livny M, Schwartz DC. Teague B, et al. Among authors: churas c. Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10848-53. doi: 10.1073/pnas.0914638107. Epub 2010 Jun 1. Proc Natl Acad Sci U S A. 2010. PMID: 20534489 Free PMC article.
A microfluidic system for large DNA molecule arrays.
Dimalanta ET, Lim A, Runnheim R, Lamers C, Churas C, Forrest DK, de Pablo JJ, Graham MD, Coppersmith SN, Goldstein S, Schwartz DC. Dimalanta ET, et al. Among authors: churas c. Anal Chem. 2004 Sep 15;76(18):5293-301. doi: 10.1021/ac0496401. Anal Chem. 2004. PMID: 15362885
A single molecule scaffold for the maize genome.
Zhou S, Wei F, Nguyen J, Bechner M, Potamousis K, Goldstein S, Pape L, Mehan MR, Churas C, Pasternak S, Forrest DK, Wise R, Ware D, Wing RA, Waterman MS, Livny M, Schwartz DC. Zhou S, et al. Among authors: churas c. PLoS Genet. 2009 Nov;5(11):e1000711. doi: 10.1371/journal.pgen.1000711. Epub 2009 Nov 20. PLoS Genet. 2009. PMID: 19936062 Free PMC article.
29 results