Vasicek TJ - Search Results

1

Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS).

Crawford GE, Holt IE, Whittle J, Webb BD, Tai D, Davis S, Margulies EH, Chen Y, Bernat JA, Ginsburg D, Zhou D, Luo S, Vasicek TJ, Daly MJ, Wolfsberg TG, Collins FS. Crawford GE, et al. Among authors: vasicek tj. Genome Res. 2006 Jan;16(1):123-31. doi: 10.1101/gr.4074106. Epub 2005 Dec 12. Genome Res. 2006. PMID: 16344561 Free PMC article.

2

An atlas of human gene expression from massively parallel signature sequencing (MPSS).

Jongeneel CV, Delorenzi M, Iseli C, Zhou D, Haudenschild CD, Khrebtukova I, Kuznetsov D, Stevenson BJ, Strausberg RL, Simpson AJ, Vasicek TJ. Jongeneel CV, et al. Among authors: vasicek tj. Genome Res. 2005 Jul;15(7):1007-14. doi: 10.1101/gr.4041005. Genome Res. 2005. PMID: 15998913 Free PMC article.

3

Massively parallel signature sequencing.

Zhou D, Rao MS, Walker R, Khrebtukova I, Haudenschild CD, Miura T, Decola S, Vermaas E, Moon K, Vasicek TJ. Zhou D, et al. Among authors: vasicek tj. Methods Mol Biol. 2006;331:285-311. doi: 10.1385/1-59745-046-4:285. Methods Mol Biol. 2006. PMID: 16881523

4

Monitoring early differentiation events in human embryonic stem cells by massively parallel signature sequencing and expressed sequence tag scan.

Miura T, Luo Y, Khrebtukova I, Brandenberger R, Zhou D, Thies RS, Vasicek T, Young H, Lebkowski J, Carpenter MK, Rao MS. Miura T, et al. Stem Cells Dev. 2004 Dec;13(6):694-715. doi: 10.1089/scd.2004.13.694. Stem Cells Dev. 2004. PMID: 15684837

5

GITR overexpression on CD4+CD25+ HTLV-1 transformed cells: detection by massively parallel signature sequencing.

Bal HP, Cheng J, Murakami A, Tallarico AS, Wang W, Zhou D, Vasicek TJ, Marasco WA. Bal HP, et al. Among authors: vasicek tj. Biochem Biophys Res Commun. 2005 Jul 1;332(2):569-84. doi: 10.1016/j.bbrc.2005.04.162. Biochem Biophys Res Commun. 2005. PMID: 15896717

6

Evidence for the presence of disease-perturbed networks in prostate cancer cells by genomic and proteomic analyses: a systems approach to disease.

Lin B, White JT, Lu W, Xie T, Utleg AG, Yan X, Yi EC, Shannon P, Khrebtukova I, Lange PH, Goodlett DR, Zhou D, Vasicek TJ, Hood L. Lin B, et al. Among authors: vasicek tj. Cancer Res. 2005 Apr 15;65(8):3081-91. doi: 10.1158/0008-5472.CAN-04-3218. Cancer Res. 2005. PMID: 15833837

7

Statistical analysis of MPSS measurements: application to the study of LPS-activated macrophage gene expression.

Stolovitzky GA, Kundaje A, Held GA, Duggar KH, Haudenschild CD, Zhou D, Vasicek TJ, Smith KD, Aderem A, Roach JC. Stolovitzky GA, et al. Among authors: vasicek tj. Proc Natl Acad Sci U S A. 2005 Feb 1;102(5):1402-7. doi: 10.1073/pnas.0406555102. Epub 2005 Jan 24. Proc Natl Acad Sci U S A. 2005. PMID: 15668391 Free PMC article.

8

KLK31P is a novel androgen regulated and transcribed pseudogene of kallikreins that is expressed at lower levels in prostate cancer cells than in normal prostate cells.

Lu W, Zhou D, Glusman G, Utleg AG, White JT, Nelson PS, Vasicek TJ, Hood L, Lin B. Lu W, et al. Among authors: vasicek tj. Prostate. 2006 Jun 15;66(9):936-44. doi: 10.1002/pros.20382. Prostate. 2006. PMID: 16541416

9

MPSS profiling of human embryonic stem cells.

Brandenberger R, Khrebtukova I, Thies RS, Miura T, Jingli C, Puri R, Vasicek T, Lebkowski J, Rao M. Brandenberger R, et al. BMC Dev Biol. 2004 Aug 10;4:10. doi: 10.1186/1471-213X-4-10. BMC Dev Biol. 2004. PMID: 15304200 Free PMC article.

10

Transcription factor expression in lipopolysaccharide-activated peripheral-blood-derived mononuclear cells.

Roach JC, Smith KD, Strobe KL, Nissen SM, Haudenschild CD, Zhou D, Vasicek TJ, Held GA, Stolovitzky GA, Hood LE, Aderem A. Roach JC, et al. Among authors: vasicek tj. Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16245-50. doi: 10.1073/pnas.0707757104. Epub 2007 Oct 3. Proc Natl Acad Sci U S A. 2007. PMID: 17913878 Free PMC article.

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