Zhu X - Search Results

1

Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression.

Deng W, Zhu X, Skogerbø G, Zhao Y, Fu Z, Wang Y, He H, Cai L, Sun H, Liu C, Li B, Bai B, Wang J, Jia D, Sun S, He H, Cui Y, Wang Y, Bu D, Chen R. Deng W, et al. Among authors: zhu x. Genome Res. 2006 Jan;16(1):20-9. doi: 10.1101/gr.4139206. Epub 2005 Dec 12. Genome Res. 2006. PMID: 16344563 Free PMC article.

2

Prediction of structured non-coding RNAs in the genomes of the nematodes Caenorhabditis elegans and Caenorhabditis briggsae.

Missal K, Zhu X, Rose D, Deng W, Skogerbø G, Chen R, Stadler PF. Missal K, et al. Among authors: zhu x. J Exp Zool B Mol Dev Evol. 2006 Jul 15;306(4):379-92. doi: 10.1002/jez.b.21086. J Exp Zool B Mol Dev Evol. 2006. PMID: 16425273

3

Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray.

He H, Cai L, Skogerbø G, Deng W, Liu T, Zhu X, Wang Y, Jia D, Zhang Z, Tao Y, Zeng H, Aftab MN, Cui Y, Liu G, Chen R. He H, et al. Among authors: zhu x. Nucleic Acids Res. 2006 May 31;34(10):2976-83. doi: 10.1093/nar/gkl371. Print 2006. Nucleic Acids Res. 2006. PMID: 16738136 Free PMC article.

4

Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray.

He H, Wang J, Liu T, Liu XS, Li T, Wang Y, Qian Z, Zheng H, Zhu X, Wu T, Shi B, Deng W, Zhou W, Skogerbø G, Chen R. He H, et al. Among authors: zhu x. Genome Res. 2007 Oct;17(10):1471-7. doi: 10.1101/gr.6611807. Epub 2007 Sep 4. Genome Res. 2007. PMID: 17785534 Free PMC article.

5

MicroRNA-encoding long non-coding RNAs.

He S, Su H, Liu C, Skogerbø G, He H, He D, Zhu X, Liu T, Zhao Y, Chen R. He S, et al. Among authors: zhu x. BMC Genomics. 2008 May 21;9:236. doi: 10.1186/1471-2164-9-236. BMC Genomics. 2008. PMID: 18492288 Free PMC article.

6

Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites.

Shi B, Guo X, Wu T, Sheng S, Wang J, Skogerbø G, Zhu X, Chen R. Shi B, et al. Among authors: zhu x. BMC Genomics. 2009 Feb 25;10:92. doi: 10.1186/1471-2164-10-92. BMC Genomics. 2009. PMID: 19243610 Free PMC article.

7

The Caenorhabditis elegans intermediate-size transcriptome shows high degree of stage-specific expression.

Wang Y, Chen J, Wei G, He H, Zhu X, Xiao T, Yuan J, Dong B, He S, Skogerbø G, Chen R. Wang Y, et al. Among authors: zhu x. Nucleic Acids Res. 2011 Jul;39(12):5203-14. doi: 10.1093/nar/gkr102. Epub 2011 Mar 4. Nucleic Acids Res. 2011. PMID: 21378118 Free PMC article.

8

NPInter: the noncoding RNAs and protein related biomacromolecules interaction database.

Wu T, Wang J, Liu C, Zhang Y, Shi B, Zhu X, Zhang Z, Skogerbø G, Chen L, Lu H, Zhao Y, Chen R. Wu T, et al. Among authors: zhu x. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D150-2. doi: 10.1093/nar/gkj025. Nucleic Acids Res. 2006. PMID: 16381834 Free PMC article.

9

Identifying Hfq-binding small RNA targets in Escherichia coli.

Zhang Y, Sun S, Wu T, Wang J, Liu C, Chen L, Zhu X, Zhao Y, Zhang Z, Shi B, Lu H, Chen R. Zhang Y, et al. Among authors: zhu x. Biochem Biophys Res Commun. 2006 May 12;343(3):950-5. doi: 10.1016/j.bbrc.2006.02.196. Epub 2006 Mar 20. Biochem Biophys Res Commun. 2006. PMID: 16574072

10

Systematic identification and characterization of chicken (Gallus gallus) ncRNAs.

Zhang Y, Wang J, Huang S, Zhu X, Liu J, Yang N, Song D, Wu R, Deng W, Skogerbø G, Wang XJ, Chen R, Zhu D. Zhang Y, et al. Among authors: zhu d, zhu x. Nucleic Acids Res. 2009 Oct;37(19):6562-74. doi: 10.1093/nar/gkp704. Epub 2009 Aug 31. Nucleic Acids Res. 2009. PMID: 19720738 Free PMC article.

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