Ausiello G - Search Results

1

A neural strategy for the inference of SH3 domain-peptide interaction specificity.

Ferraro E, Via A, Ausiello G, Helmer-Citterich M. Ferraro E, et al. Among authors: ausiello g. BMC Bioinformatics. 2005 Dec 1;6 Suppl 4(Suppl 4):S13. doi: 10.1186/1471-2105-6-S4-S13. BMC Bioinformatics. 2005. PMID: 16351739 Free PMC article.

2

ESCHER: a new docking procedure applied to the reconstruction of protein tertiary structure.

Ausiello G, Cesareni G, Helmer-Citterich M. Ausiello G, et al. Proteins. 1997 Aug;28(4):556-67. Proteins. 1997. PMID: 9261871 Free article.

3

Correlated mutations contain information about protein-protein interaction.

Pazos F, Helmer-Citterich M, Ausiello G, Valencia A. Pazos F, et al. Among authors: ausiello g. J Mol Biol. 1997 Aug 29;271(4):511-23. doi: 10.1006/jmbi.1997.1198. J Mol Biol. 1997. PMID: 9281423

4

Three-dimensional profiles: a new tool to identify protein surface similarities.

de Rinaldis M, Ausiello G, Cesareni G, Helmer-Citterich M. de Rinaldis M, et al. Among authors: ausiello g. J Mol Biol. 1998 Dec 11;284(4):1211-21. doi: 10.1006/jmbi.1998.2248. J Mol Biol. 1998. PMID: 9837739

5

MINT: a Molecular INTeraction database.

Zanzoni A, Montecchi-Palazzi L, Quondam M, Ausiello G, Helmer-Citterich M, Cesareni G. Zanzoni A, et al. Among authors: ausiello g. FEBS Lett. 2002 Feb 20;513(1):135-40. doi: 10.1016/s0014-5793(01)03293-8. FEBS Lett. 2002. PMID: 11911893 Free article. Review.

6

ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.

Puntervoll P, Linding R, Gemünd C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DM, Ausiello G, Brannetti B, Costantini A, Ferrè F, Maselli V, Via A, Cesareni G, Diella F, Superti-Furga G, Wyrwicz L, Ramu C, McGuigan C, Gudavalli R, Letunic I, Bork P, Rychlewski L, Küster B, Helmer-Citterich M, Hunter WN, Aasland R, Gibson TJ. Puntervoll P, et al. Among authors: ausiello g. Nucleic Acids Res. 2003 Jul 1;31(13):3625-30. doi: 10.1093/nar/gkg545. Nucleic Acids Res. 2003. PMID: 12824381 Free PMC article.

7

SURFACE: a database of protein surface regions for functional annotation.

Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M. Ferrè F, et al. Among authors: ausiello g. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D240-4. doi: 10.1093/nar/gkh054. Nucleic Acids Res. 2004. PMID: 14681403 Free PMC article.

8

pdbFun: mass selection and fast comparison of annotated PDB residues.

Ausiello G, Zanzoni A, Peluso D, Via A, Helmer-Citterich M. Ausiello G, et al. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W133-7. doi: 10.1093/nar/gki499. Nucleic Acids Res. 2005. PMID: 15980442 Free PMC article.

9

Functional annotation by identification of local surface similarities: a novel tool for structural genomics.

Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M. Ferrè F, et al. Among authors: ausiello g. BMC Bioinformatics. 2005 Aug 2;6:194. doi: 10.1186/1471-2105-6-194. BMC Bioinformatics. 2005. PMID: 16076399 Free PMC article.

10

Query3d: a new method for high-throughput analysis of functional residues in protein structures.

Ausiello G, Via A, Helmer-Citterich M. Ausiello G, et al. BMC Bioinformatics. 2005 Dec 1;6 Suppl 4(Suppl 4):S5. doi: 10.1186/1471-2105-6-S4-S5. BMC Bioinformatics. 2005. PMID: 16351754 Free PMC article.

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