Bunkenborg J - Search Results

1

Interpretation of collision-induced fragmentation tandem mass spectra of posttranslationally modified peptides.

Bunkenborg J, Matthiesen R. Bunkenborg J, et al. Methods Mol Biol. 2007;367:169-94. doi: 10.1385/1-59745-275-0:169. Methods Mol Biol. 2007. PMID: 17185776

2

Database-independent, database-dependent, and extended interpretation of peptide mass spectra in VEMS V2.0.

Matthiesen R, Bunkenborg J, Stensballe A, Jensen ON, Welinder KG, Bauw G. Matthiesen R, et al. Among authors: bunkenborg j. Proteomics. 2004 Sep;4(9):2583-93. doi: 10.1002/pmic.200300792. Proteomics. 2004. PMID: 15352233

3

VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.

Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON. Matthiesen R, et al. Among authors: bunkenborg j. J Proteome Res. 2005 Nov-Dec;4(6):2338-47. doi: 10.1021/pr050264q. J Proteome Res. 2005. PMID: 16335983

4

Introduction to mass spectrometry-based proteomics.

Matthiesen R, Bunkenborg J. Matthiesen R, et al. Among authors: bunkenborg j. Methods Mol Biol. 2013;1007:1-45. doi: 10.1007/978-1-62703-392-3_1. Methods Mol Biol. 2013. PMID: 23666720

5

Interpretation of tandem mass spectra of posttranslationally modified peptides.

Bunkenborg J, Matthiesen R. Bunkenborg J, et al. Methods Mol Biol. 2013;1007:139-71. doi: 10.1007/978-1-62703-392-3_6. Methods Mol Biol. 2013. PMID: 23666725

6

Introduction to Mass Spectrometry-Based Proteomics.

Matthiesen R, Bunkenborg J. Matthiesen R, et al. Among authors: bunkenborg j. Methods Mol Biol. 2020;2051:1-58. doi: 10.1007/978-1-4939-9744-2_1. Methods Mol Biol. 2020. PMID: 31552623

7

Interpretation of Tandem Mass Spectra of Posttranslationally Modified Peptides.

Bunkenborg J, Matthiesen R. Bunkenborg J, et al. Methods Mol Biol. 2020;2051:199-230. doi: 10.1007/978-1-4939-9744-2_8. Methods Mol Biol. 2020. PMID: 31552630

8

Quantitation of multisite EGF receptor phosphorylation using mass spectrometry and a novel normalization approach.

Boeri Erba E, Matthiesen R, Bunkenborg J, Schulze WX, Di Stefano P, Cabodi S, Tarone G, Defilippi P, Jensen ON. Boeri Erba E, et al. Among authors: bunkenborg j. J Proteome Res. 2007 Jul;6(7):2768-85. doi: 10.1021/pr060675m. Epub 2007 May 25. J Proteome Res. 2007. PMID: 17523611

9

An enzymatic deglycosylation scheme enabling identification of core fucosylated N-glycans and O-glycosylation site mapping of human plasma proteins.

Hägglund P, Matthiesen R, Elortza F, Højrup P, Roepstorff P, Jensen ON, Bunkenborg J. Hägglund P, et al. Among authors: bunkenborg j. J Proteome Res. 2007 Aug;6(8):3021-31. doi: 10.1021/pr0700605. Epub 2007 Jul 18. J Proteome Res. 2007. PMID: 17636988

10

MSQuant, an open source platform for mass spectrometry-based quantitative proteomics.

Mortensen P, Gouw JW, Olsen JV, Ong SE, Rigbolt KT, Bunkenborg J, Cox J, Foster LJ, Heck AJ, Blagoev B, Andersen JS, Mann M. Mortensen P, et al. Among authors: bunkenborg j. J Proteome Res. 2010 Jan;9(1):393-403. doi: 10.1021/pr900721e. J Proteome Res. 2010. PMID: 19888749

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