Borneman J - Search Results

1

A software system for gene sequence database construction.

Liu Z, Borneman J, Jiang T. Liu Z, et al. Among authors: borneman j. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:2797-800. doi: 10.1109/IEMBS.2004.1403799. Conf Proc IEEE Eng Med Biol Soc. 2004. PMID: 17270858

2

Probe selection algorithms with applications in the analysis of microbial communities.

Borneman J, Chrobak M, Della Vedova G, Figueroa A, Jiang T. Borneman J, et al. Bioinformatics. 2001;17 Suppl 1:S39-48. doi: 10.1093/bioinformatics/17.suppl_1.s39. Bioinformatics. 2001. PMID: 11472991

3

Analysis of bacterial community composition by oligonucleotide fingerprinting of rRNA genes.

Valinsky L, Della Vedova G, Scupham AJ, Alvey S, Figueroa A, Yin B, Hartin RJ, Chrobak M, Crowley DE, Jiang T, Borneman J. Valinsky L, et al. Among authors: borneman j. Appl Environ Microbiol. 2002 Jul;68(7):3243-50. doi: 10.1128/AEM.68.7.3243-3250.2002. Appl Environ Microbiol. 2002. PMID: 12089000 Free PMC article.

4

Oligonucleotide fingerprinting of rRNA genes for analysis of fungal community composition.

Valinsky L, Della Vedova G, Jiang T, Borneman J. Valinsky L, et al. Among authors: borneman j. Appl Environ Microbiol. 2002 Dec;68(12):5999-6004. doi: 10.1128/AEM.68.12.5999-6004.2002. Appl Environ Microbiol. 2002. PMID: 12450821 Free PMC article.

5

Clustering binary fingerprint vectors with missing values for DNA array data analysis.

Figueroa A, Borneman J, Jiang T. Figueroa A, et al. Among authors: borneman j. J Comput Biol. 2004;11(5):887-901. doi: 10.1089/cmb.2004.11.887. J Comput Biol. 2004. PMID: 15700408

6

Clustering binary fingerprint vectors with missing values for DNA array data analysis.

Figueroa A, Borneman J, Jiang T. Figueroa A, et al. Among authors: borneman j. Proc IEEE Comput Soc Bioinform Conf. 2003;2:38-47. Proc IEEE Comput Soc Bioinform Conf. 2003. PMID: 16452777

7

Development of a 9600-clone procedure for oligonucleotide fingerprinting of rRNA genes: utilization to identify soil bacterial rRNA genes that correlate in abundance with the development of avocado root rot.

Bent E, Yin B, Figueroa A, Ye J, Fu Q, Liu Z, McDonald V, Jeske D, Jiang T, Borneman J. Bent E, et al. Among authors: borneman j. J Microbiol Methods. 2006 Oct;67(1):171-80. doi: 10.1016/j.mimet.2006.03.023. Epub 2006 May 18. J Microbiol Methods. 2006. PMID: 16712989

8

Building phylogenetic trees from binary oligonucleotide fingerprint vectors.

Figueroa A, Liu Z, Mancini-Jones R, Borneman J, Jiang T. Figueroa A, et al. Among authors: borneman j. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:2844-7. doi: 10.1109/IEMBS.2004.1403811. Conf Proc IEEE Eng Med Biol Soc. 2004. PMID: 17270870

9

Improved probe selection for DNA arrays using nonparametric kernel density estimation.

Fu Q, Borneman J, Ye J, Chrobak M. Fu Q, et al. Among authors: borneman j. Conf Proc IEEE Eng Med Biol Soc. 2005;2006:902-5. doi: 10.1109/IEMBS.2005.1616561. Conf Proc IEEE Eng Med Biol Soc. 2005. PMID: 17282330

10

A software system for gene sequence database construction based on fast approximate string matching.

Liu Z, Borneman J, Jiang T. Liu Z, et al. Among authors: borneman j. Int J Bioinform Res Appl. 2005;1(3):273-91. doi: 10.1504/IJBRA.2005.007906. Int J Bioinform Res Appl. 2005. PMID: 18048136

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