Venable JD - Search Results

1

Relative quantification of stable isotope labeled peptides using a linear ion trap-Orbitrap hybrid mass spectrometer.

Venable JD, Wohlschlegel J, McClatchy DB, Park SK, Yates JR 3rd. Venable JD, et al. Anal Chem. 2007 Apr 15;79(8):3056-64. doi: 10.1021/ac062054i. Epub 2007 Mar 17. Anal Chem. 2007. PMID: 17367114 Free PMC article.

2

Improving protein identification sensitivity by combining MS and MS/MS information for shotgun proteomics using LTQ-Orbitrap high mass accuracy data.

Lu B, Motoyama A, Ruse C, Venable J, Yates JR 3rd. Lu B, et al. Anal Chem. 2008 Mar 15;80(6):2018-25. doi: 10.1021/ac701697w. Epub 2008 Feb 15. Anal Chem. 2008. PMID: 18275164 Free PMC article.

3

Impact of ion trap tandem mass spectra variability on the identification of peptides.

Venable JD, Yates JR 3rd. Venable JD, et al. Anal Chem. 2004 May 15;76(10):2928-37. doi: 10.1021/ac0348219. Anal Chem. 2004. PMID: 15144207

4

Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra.

Venable JD, Dong MQ, Wohlschlegel J, Dillin A, Yates JR. Venable JD, et al. Nat Methods. 2004 Oct;1(1):39-45. doi: 10.1038/nmeth705. Epub 2004 Sep 29. Nat Methods. 2004. PMID: 15782151

5

Cross-correlation algorithm for calculation of peptide molecular weight from tandem mass spectra.

Venable JD, Xu T, Cociorva D, Yates JR 3rd. Venable JD, et al. Anal Chem. 2006 Mar 15;78(6):1921-9. doi: 10.1021/ac051636h. Anal Chem. 2006. PMID: 16536429

6

Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples.

Motoyama A, Venable JD, Ruse CI, Yates JR 3rd. Motoyama A, et al. Among authors: venable jd. Anal Chem. 2006 Jul 15;78(14):5109-18. doi: 10.1021/ac060354u. Anal Chem. 2006. PMID: 16841936

7

15N metabolic labeling of mammalian tissue with slow protein turnover.

McClatchy DB, Dong MQ, Wu CC, Venable JD, Yates JR 3rd. McClatchy DB, et al. Among authors: venable jd. J Proteome Res. 2007 May;6(5):2005-10. doi: 10.1021/pr060599n. Epub 2007 Mar 22. J Proteome Res. 2007. PMID: 17375949 Free PMC article.

8

Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development.

McClatchy DB, Liao L, Park SK, Venable JD, Yates JR. McClatchy DB, et al. Among authors: venable jd. Genome Res. 2007 Sep;17(9):1378-88. doi: 10.1101/gr.6375007. Epub 2007 Aug 3. Genome Res. 2007. PMID: 17675365 Free PMC article.

9

A quantitative analysis software tool for mass spectrometry-based proteomics.

Park SK, Venable JD, Xu T, Yates JR 3rd. Park SK, et al. Among authors: venable jd. Nat Methods. 2008 Apr;5(4):319-22. doi: 10.1038/nmeth.1195. Epub 2008 Mar 16. Nat Methods. 2008. PMID: 18345006 Free PMC article.

10

Comparison of different signal thresholds on data dependent sampling in Orbitrap and LTQ mass spectrometry for the identification of peptides and proteins in complex mixtures.

Wong CC, Cociorva D, Venable JD, Xu T, Yates JR 3rd. Wong CC, et al. Among authors: venable jd. J Am Soc Mass Spectrom. 2009 Aug;20(8):1405-14. doi: 10.1016/j.jasms.2009.04.007. Epub 2009 Apr 18. J Am Soc Mass Spectrom. 2009. PMID: 19467883 Free PMC article.

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