Irizarry R - Search Results

1

Analysis of genetic interactions on a genome-wide scale in budding yeast: diploid-based synthetic lethality analysis by microarray.

Meluh PB, Pan X, Yuan DS, Tiffany C, Chen O, Sookhai-Mahadeo S, Wang X, Peyser BD, Irizarry R, Spencer FA, Boeke JD. Meluh PB, et al. Among authors: irizarry r. Methods Mol Biol. 2008;416:221-47. doi: 10.1007/978-1-59745-321-9_15. Methods Mol Biol. 2008. PMID: 18392971

2

Statistical analysis of fitness data determined by TAG hybridization on microarrays.

Peyser BD, Irizarry R, Spencer FA. Peyser BD, et al. Among authors: irizarry r. Methods Mol Biol. 2008;416:369-81. doi: 10.1007/978-1-59745-321-9_25. Methods Mol Biol. 2008. PMID: 18392981

3

Improved statistical analysis of budding yeast TAG microarrays revealed by defined spike-in pools.

Peyser BD, Irizarry RA, Tiffany CW, Chen O, Yuan DS, Boeke JD, Spencer FA. Peyser BD, et al. Nucleic Acids Res. 2005 Sep 15;33(16):e140. doi: 10.1093/nar/gni138. Nucleic Acids Res. 2005. PMID: 16166654 Free PMC article.

4

Global synthetic-lethality analysis and yeast functional profiling.

Ooi SL, Pan X, Peyser BD, Ye P, Meluh PB, Yuan DS, Irizarry RA, Bader JS, Spencer FA, Boeke JD. Ooi SL, et al. Trends Genet. 2006 Jan;22(1):56-63. doi: 10.1016/j.tig.2005.11.003. Epub 2005 Nov 23. Trends Genet. 2006. PMID: 16309778 Review.

5

Improved microarray methods for profiling the Yeast Knockout strain collection.

Yuan DS, Pan X, Ooi SL, Peyser BD, Spencer FA, Irizarry RA, Boeke JD. Yuan DS, et al. Nucleic Acids Res. 2005 Jul 1;33(12):e103. doi: 10.1093/nar/gni105. Nucleic Acids Res. 2005. PMID: 15994458 Free PMC article.

6

S-phase checkpoint genes safeguard high-fidelity sister chromatid cohesion.

Warren CD, Eckley DM, Lee MS, Hanna JS, Hughes A, Peyser B, Jie C, Irizarry R, Spencer FA. Warren CD, et al. Among authors: irizarry r. Mol Biol Cell. 2004 Apr;15(4):1724-35. doi: 10.1091/mbc.e03-09-0637. Epub 2004 Jan 23. Mol Biol Cell. 2004. PMID: 14742710 Free PMC article.

7

Use of mixture models in a microarray-based screening procedure for detecting differentially represented yeast mutants.

Irizarry RA, Ooi SL, Wu Z, Boeke JD. Irizarry RA, et al. Stat Appl Genet Mol Biol. 2003;2:Article1. doi: 10.2202/1544-6115.1002. Epub 2003 Mar 18. Stat Appl Genet Mol Biol. 2003. PMID: 16646779

8

Nucleocytosolic acetyl-coenzyme a synthetase is required for histone acetylation and global transcription.

Takahashi H, McCaffery JM, Irizarry RA, Boeke JD. Takahashi H, et al. Mol Cell. 2006 Jul 21;23(2):207-17. doi: 10.1016/j.molcel.2006.05.040. Mol Cell. 2006. PMID: 16857587 Free article.

9

High-resolution spatial normalization for microarrays containing embedded technical replicates.

Yuan DS, Irizarry RA. Yuan DS, et al. Bioinformatics. 2006 Dec 15;22(24):3054-60. doi: 10.1093/bioinformatics/btl542. Epub 2006 Oct 23. Bioinformatics. 2006. PMID: 17060357 Free PMC article.

10

Stacking the deck: double-tiled DNA microarrays.

Wheelan SJ, Martínez-Murillo F, Irizarry RA, Boeke JD. Wheelan SJ, et al. Nat Methods. 2006 Nov;3(11):903-7. doi: 10.1038/nmeth951. Nat Methods. 2006. PMID: 17060914

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