Donohue DE - Search Results

1

The neuroscience information framework: a data and knowledge environment for neuroscience.

Gardner D, Akil H, Ascoli GA, Bowden DM, Bug W, Donohue DE, Goldberg DH, Grafstein B, Grethe JS, Gupta A, Halavi M, Kennedy DN, Marenco L, Martone ME, Miller PL, Müller HM, Robert A, Shepherd GM, Sternberg PW, Van Essen DC, Williams RW. Gardner D, et al. Among authors: donohue de. Neuroinformatics. 2008 Sep;6(3):149-60. doi: 10.1007/s12021-008-9024-z. Epub 2008 Oct 23. Neuroinformatics. 2008. PMID: 18946742 Free PMC article.

2

NeuroMorpho.Org implementation of digital neuroscience: dense coverage and integration with the NIF.

Halavi M, Polavaram S, Donohue DE, Hamilton G, Hoyt J, Smith KP, Ascoli GA. Halavi M, et al. Among authors: donohue de. Neuroinformatics. 2008 Sep;6(3):241-52. doi: 10.1007/s12021-008-9030-1. Epub 2008 Oct 24. Neuroinformatics. 2008. PMID: 18949582 Free PMC article.

3

A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks.

Brown KM, Donohue DE, D'Alessandro G, Ascoli GA. Brown KM, et al. Among authors: donohue de. Neuroinformatics. 2005;3(4):343-60. doi: 10.1385/NI:3:4:343. Neuroinformatics. 2005. PMID: 16284416

4

NeuroMorpho.Org: a central resource for neuronal morphologies.

Ascoli GA, Donohue DE, Halavi M. Ascoli GA, et al. Among authors: donohue de. J Neurosci. 2007 Aug 29;27(35):9247-51. doi: 10.1523/JNEUROSCI.2055-07.2007. J Neurosci. 2007. PMID: 17728438 Free PMC article. No abstract available.

5

Automated reconstruction of neuronal morphology: an overview.

Donohue DE, Ascoli GA. Donohue DE, et al. Brain Res Rev. 2011 Jun 24;67(1-2):94-102. doi: 10.1016/j.brainresrev.2010.11.003. Epub 2010 Nov 27. Brain Res Rev. 2011. PMID: 21118703 Free PMC article. Review.

6

A comparative computer simulation of dendritic morphology.

Donohue DE, Ascoli GA. Donohue DE, et al. PLoS Comput Biol. 2008 Jun 6;4(5):e1000089. doi: 10.1371/journal.pcbi.1000089. PLoS Comput Biol. 2008. PMID: 18483611 Free PMC article.

7

Local diameter fully constrains dendritic size in basal but not apical trees of CA1 pyramidal neurons.

Donohue DE, Ascoli GA. Donohue DE, et al. J Comput Neurosci. 2005 Oct;19(2):223-38. doi: 10.1007/s10827-005-1850-5. J Comput Neurosci. 2005. PMID: 16133820

8

Gene expression profiling of whole blood: A comparative assessment of RNA-stabilizing collection methods.

Donohue DE, Gautam A, Miller SA, Srinivasan S, Abu-Amara D, Campbell R, Marmar CR, Hammamieh R, Jett M. Donohue DE, et al. PLoS One. 2019 Oct 10;14(10):e0223065. doi: 10.1371/journal.pone.0223065. eCollection 2019. PLoS One. 2019. PMID: 31600258 Free PMC article.

9

Investigating gene expression profiles of whole blood and peripheral blood mononuclear cells using multiple collection and processing methods.

Gautam A, Donohue D, Hoke A, Miller SA, Srinivasan S, Sowe B, Detwiler L, Lynch J, Levangie M, Hammamieh R, Jett M. Gautam A, et al. PLoS One. 2019 Dec 6;14(12):e0225137. doi: 10.1371/journal.pone.0225137. eCollection 2019. PLoS One. 2019. PMID: 31809517 Free PMC article.

10

Metabolomic analysis of male combat veterans with post traumatic stress disorder.

Mellon SH, Bersani FS, Lindqvist D, Hammamieh R, Donohue D, Dean K, Jett M, Yehuda R, Flory J, Reus VI, Bierer LM, Makotkine I, Abu Amara D, Henn Haase C, Coy M, Doyle FJ 3rd, Marmar C, Wolkowitz OM. Mellon SH, et al. PLoS One. 2019 Mar 18;14(3):e0213839. doi: 10.1371/journal.pone.0213839. eCollection 2019. PLoS One. 2019. PMID: 30883584 Free PMC article.

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