Rubin D - Search Results

1

The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience.

Bug WJ, Ascoli GA, Grethe JS, Gupta A, Fennema-Notestine C, Laird AR, Larson SD, Rubin D, Shepherd GM, Turner JA, Martone ME. Bug WJ, et al. Among authors: rubin d. Neuroinformatics. 2008 Sep;6(3):175-94. doi: 10.1007/s12021-008-9032-z. Epub 2008 Oct 31. Neuroinformatics. 2008. PMID: 18975148 Free PMC article.

2

iTools: a framework for classification, categorization and integration of computational biology resources.

Dinov ID, Rubin D, Lorensen W, Dugan J, Ma J, Murphy S, Kirschner B, Bug W, Sherman M, Floratos A, Kennedy D, Jagadish HV, Schmidt J, Athey B, Califano A, Musen M, Altman R, Kikinis R, Kohane I, Delp S, Parker DS, Toga AW. Dinov ID, et al. Among authors: rubin d. PLoS One. 2008 May 28;3(5):e2265. doi: 10.1371/journal.pone.0002265. PLoS One. 2008. PMID: 18509477 Free PMC article.

3

Data federation in the Biomedical Informatics Research Network: tools for semantic annotation and query of distributed multiscale brain data.

Bug W, Astahkov V, Boline J, Fennema-Notestine C, Grethe JS, Gupta A, Kennedy DN, Rubin DL, Sanders B, Turner JA, Martone ME. Bug W, et al. AMIA Annu Symp Proc. 2008 Nov 6:1220. AMIA Annu Symp Proc. 2008. PMID: 18999211

4

Application of neuroanatomical ontologies for neuroimaging data annotation.

Turner JA, Mejino JL, Brinkley JF, Detwiler LT, Lee HJ, Martone ME, Rubin DL. Turner JA, et al. Front Neuroinform. 2010 Jun 10;4:10. doi: 10.3389/fninf.2010.00010. eCollection 2010. Front Neuroinform. 2010. PMID: 20725521 Free PMC article.

5

Neuroanatomical domain of the foundational model of anatomy ontology.

Nichols BN, Mejino JL, Detwiler LT, Nilsen TT, Martone ME, Turner JA, Rubin DL, Brinkley JF. Nichols BN, et al. J Biomed Semantics. 2014 Jan 8;5(1):1. doi: 10.1186/2041-1480-5-1. J Biomed Semantics. 2014. PMID: 24398054 Free PMC article.

6

A robust classifier to distinguish noise from fMRI independent components.

Sochat V, Supekar K, Bustillo J, Calhoun V, Turner JA, Rubin DL. Sochat V, et al. PLoS One. 2014 Apr 18;9(4):e95493. doi: 10.1371/journal.pone.0095493. eCollection 2014. PLoS One. 2014. PMID: 24748378 Free PMC article.

7

Challenges in converting frame-based ontology into OWL: the Foundational Model of Anatomy case-study.

Dameron O, Rubin DL, Musen MA. Dameron O, et al. AMIA Annu Symp Proc. 2005;2005:181-5. AMIA Annu Symp Proc. 2005. PMID: 16779026 Free PMC article.

8

Biomedical ontologies: a functional perspective.

Rubin DL, Shah NH, Noy NF. Rubin DL, et al. Brief Bioinform. 2008 Jan;9(1):75-90. doi: 10.1093/bib/bbm059. Epub 2007 Dec 12. Brief Bioinform. 2008. PMID: 18077472 Review.

9

Web service access to semantic web ontologies for data annotation.

Franklin JD, Mejino JL, Detwiler LT, Rubin DL, Brinkley JF. Franklin JD, et al. Among authors: rubin dl. AMIA Annu Symp Proc. 2008 Nov 6:946. AMIA Annu Symp Proc. 2008. PMID: 18998840

10

Comparison of concept recognizers for building the Open Biomedical Annotator.

Shah NH, Bhatia N, Jonquet C, Rubin D, Chiang AP, Musen MA. Shah NH, et al. Among authors: rubin d. BMC Bioinformatics. 2009 Sep 17;10 Suppl 9(Suppl 9):S14. doi: 10.1186/1471-2105-10-S9-S14. BMC Bioinformatics. 2009. PMID: 19761568 Free PMC article.

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