Draper B - Search Results

1

The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces.

Sun S, Kondabagil K, Draper B, Alam TI, Bowman VD, Zhang Z, Hegde S, Fokine A, Rossmann MG, Rao VB. Sun S, et al. Among authors: draper b. Cell. 2008 Dec 26;135(7):1251-62. doi: 10.1016/j.cell.2008.11.015. Cell. 2008. PMID: 19109896 Free article.

2

An ATP hydrolysis sensor in the DNA packaging motor from bacteriophage T4 suggests an inchworm-type translocation mechanism.

Draper B, Rao VB. Draper B, et al. J Mol Biol. 2007 May 25;369(1):79-94. doi: 10.1016/j.jmb.2007.03.019. Epub 2007 Mar 15. J Mol Biol. 2007. PMID: 17428497

3

Adenine recognition is a key checkpoint in the energy release mechanism of phage T4 DNA packaging motor.

Kondabagil K, Draper B, Rao VB. Kondabagil K, et al. Among authors: draper b. J Mol Biol. 2012 Jan 13;415(2):329-42. doi: 10.1016/j.jmb.2011.11.013. Epub 2011 Nov 12. J Mol Biol. 2012. PMID: 22100308

4

The headful packaging nuclease of bacteriophage T4.

Alam TI, Draper B, Kondabagil K, Rentas FJ, Ghosh-Kumar M, Sun S, Rossmann MG, Rao VB. Alam TI, et al. Among authors: draper b. Mol Microbiol. 2008 Sep;69(5):1180-90. doi: 10.1111/j.1365-2958.2008.06344.x. Epub 2008 Jul 4. Mol Microbiol. 2008. PMID: 18627466 Free article.

5

Regulation by interdomain communication of a headful packaging nuclease from bacteriophage T4.

Ghosh-Kumar M, Alam TI, Draper B, Stack JD, Rao VB. Ghosh-Kumar M, et al. Among authors: draper b. Nucleic Acids Res. 2011 Apr;39(7):2742-55. doi: 10.1093/nar/gkq1191. Epub 2010 Nov 24. Nucleic Acids Res. 2011. PMID: 21109524 Free PMC article.

6

Portal-large terminase interactions of the bacteriophage T4 DNA packaging machine implicate a molecular lever mechanism for coupling ATPase to DNA translocation.

Hegde S, Padilla-Sanchez V, Draper B, Rao VB. Hegde S, et al. Among authors: draper b. J Virol. 2012 Apr;86(8):4046-57. doi: 10.1128/JVI.07197-11. Epub 2012 Feb 15. J Virol. 2012. PMID: 22345478 Free PMC article.

7

Designing a nine cysteine-less DNA packaging motor from bacteriophage T4 reveals new insights into ATPase structure and function.

Kondabagil K, Dai L, Vafabakhsh R, Ha T, Draper B, Rao VB. Kondabagil K, et al. Among authors: draper b. Virology. 2014 Nov;468-470:660-668. doi: 10.1016/j.virol.2014.08.033. Epub 2014 Oct 16. Virology. 2014. PMID: 25443668 Free PMC article.

8

Mutations altering a structurally conserved loop-helix-loop region of a viral packaging motor change DNA translocation velocity and processivity.

Tsay JM, Sippy J, DelToro D, Andrews BT, Draper B, Rao V, Catalano CE, Feiss M, Smith DE. Tsay JM, et al. Among authors: draper b. J Biol Chem. 2010 Jul 30;285(31):24282-9. doi: 10.1074/jbc.M110.129395. Epub 2010 Jun 4. J Biol Chem. 2010. PMID: 20525695 Free PMC article.

9

LightCycler-based quantitative PCR for detection of cytomegalovirus in blood, urine, and respiratory samples.

Kearns AM, Draper B, Wipat W, Turner AJ, Wheeler J, Freeman R, Harwood J, Gould FK, Dark JH. Kearns AM, et al. Among authors: draper b. J Clin Microbiol. 2001 Jun;39(6):2364-5. doi: 10.1128/JCM.39.6.2364-2365.2001. J Clin Microbiol. 2001. PMID: 11414242 Free PMC article. No abstract available.

10

Knockdown proteomics reveals USP7 as a regulator of cell-cell adhesion in colorectal cancer via AJUBA.

Al-Eidan A, Draper B, Wang S, Coke B, Skipp P, Wang Y, Ewing RM. Al-Eidan A, et al. Among authors: draper b. Mol Cell Proteomics. 2024 Nov 8:100878. doi: 10.1016/j.mcpro.2024.100878. Online ahead of print. Mol Cell Proteomics. 2024. PMID: 39522755 Free article.

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