Baker D - Search Results

1

The structure of a receptor with two associating transmembrane domains on the cell surface: integrin alphaIIbbeta3.

Zhu J, Luo BH, Barth P, Schonbrun J, Baker D, Springer TA. Zhu J, et al. Among authors: baker d. Mol Cell. 2009 Apr 24;34(2):234-49. doi: 10.1016/j.molcel.2009.02.022. Mol Cell. 2009. PMID: 19394300 Free PMC article.

2

Protein structure prediction in 2002.

Schonbrun J, Wedemeyer WJ, Baker D. Schonbrun J, et al. Among authors: baker d. Curr Opin Struct Biol. 2002 Jun;12(3):348-54. doi: 10.1016/s0959-440x(02)00336-6. Curr Opin Struct Biol. 2002. PMID: 12127454 Review.

3

Rosetta predictions in CASP5: successes, failures, and prospects for complete automation.

Bradley P, Chivian D, Meiler J, Misura KM, Rohl CA, Schief WR, Wedemeyer WJ, Schueler-Furman O, Murphy P, Schonbrun J, Strauss CE, Baker D. Bradley P, et al. Among authors: baker d. Proteins. 2003;53 Suppl 6:457-68. doi: 10.1002/prot.10552. Proteins. 2003. PMID: 14579334

4

Free modeling with Rosetta in CASP6.

Bradley P, Malmström L, Qian B, Schonbrun J, Chivian D, Kim DE, Meiler J, Misura KMS, Baker D. Bradley P, et al. Among authors: baker d. Proteins. 2005;61 Suppl 7:128-134. doi: 10.1002/prot.20729. Proteins. 2005. PMID: 16187354

5

Prediction of CASP6 structures using automated Robetta protocols.

Chivian D, Kim DE, Malmström L, Schonbrun J, Rohl CA, Baker D. Chivian D, et al. Among authors: baker d. Proteins. 2005;61 Suppl 7:157-166. doi: 10.1002/prot.20733. Proteins. 2005. PMID: 16187358

6

Rational design of intercellular adhesion molecule-1 (ICAM-1) variants for antagonizing integrin lymphocyte function-associated antigen-1-dependent adhesion.

Song G, Lazar GA, Kortemme T, Shimaoka M, Desjarlais JR, Baker D, Springer TA. Song G, et al. Among authors: baker d. J Biol Chem. 2006 Feb 24;281(8):5042-9. doi: 10.1074/jbc.M510454200. Epub 2005 Dec 14. J Biol Chem. 2006. PMID: 16354667 Free PMC article.

7

Multipass membrane protein structure prediction using Rosetta.

Yarov-Yarovoy V, Schonbrun J, Baker D. Yarov-Yarovoy V, et al. Among authors: baker d. Proteins. 2006 Mar 1;62(4):1010-25. doi: 10.1002/prot.20817. Proteins. 2006. PMID: 16372357 Free PMC article.

8

Toward high-resolution prediction and design of transmembrane helical protein structures.

Barth P, Schonbrun J, Baker D. Barth P, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15682-7. doi: 10.1073/pnas.0702515104. Epub 2007 Sep 28. Proc Natl Acad Sci U S A. 2007. PMID: 17905872 Free PMC article.

9

Rationally designed integrin beta3 mutants stabilized in the high affinity conformation.

Luo BH, Karanicolas J, Harmacek LD, Baker D, Springer TA. Luo BH, et al. Among authors: baker d. J Biol Chem. 2009 Feb 6;284(6):3917-24. doi: 10.1074/jbc.M806312200. Epub 2008 Nov 19. J Biol Chem. 2009. PMID: 19019827 Free PMC article.

10

Prediction of membrane protein structures with complex topologies using limited constraints.

Barth P, Wallner B, Baker D. Barth P, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1409-14. doi: 10.1073/pnas.0808323106. Proc Natl Acad Sci U S A. 2009. PMID: 19190187 Free PMC article.

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