Shah MB - Search Results

1

Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (Group II) and "Leptospirillum ferrodiazotrophum" (Group III) bacteria in acid mine drainage biofilms.

Goltsman DS, Denef VJ, Singer SW, VerBerkmoes NC, Lefsrud M, Mueller RS, Dick GJ, Sun CL, Wheeler KE, Zemla A, Baker BJ, Hauser L, Land M, Shah MB, Thelen MP, Hettich RL, Banfield JF. Goltsman DS, et al. Among authors: shah mb. Appl Environ Microbiol. 2009 Jul;75(13):4599-615. doi: 10.1128/AEM.02943-08. Epub 2009 May 8. Appl Environ Microbiol. 2009. PMID: 19429552 Free PMC article.

2

Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria.

Lo I, Denef VJ, Verberkmoes NC, Shah MB, Goltsman D, DiBartolo G, Tyson GW, Allen EE, Ram RJ, Detter JC, Richardson P, Thelen MP, Hettich RL, Banfield JF. Lo I, et al. Among authors: shah mb. Nature. 2007 Mar 29;446(7135):537-41. doi: 10.1038/nature05624. Epub 2007 Mar 7. Nature. 2007. PMID: 17344860

3

Implications of strain- and species-level sequence divergence for community and isolate shotgun proteomic analysis.

Denef VJ, Shah MB, Verberkmoes NC, Hettich RL, Banfield JF. Denef VJ, et al. Among authors: shah mb. J Proteome Res. 2007 Aug;6(8):3152-61. doi: 10.1021/pr0701005. Epub 2007 Jun 28. J Proteome Res. 2007. PMID: 17602579

4

Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation.

Denef VJ, VerBerkmoes NC, Shah MB, Abraham P, Lefsrud M, Hettich RL, Banfield JF. Denef VJ, et al. Among authors: shah mb. Environ Microbiol. 2009 Feb;11(2):313-25. doi: 10.1111/j.1462-2920.2008.01769.x. Epub 2008 Sep 23. Environ Microbiol. 2009. PMID: 18826438

5

Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.

Wilkins MJ, Verberkmoes NC, Williams KH, Callister SJ, Mouser PJ, Elifantz H, N'guessan AL, Thomas BC, Nicora CD, Shah MB, Abraham P, Lipton MS, Lovley DR, Hettich RL, Long PE, Banfield JF. Wilkins MJ, et al. Among authors: shah mb. Appl Environ Microbiol. 2009 Oct;75(20):6591-9. doi: 10.1128/AEM.01064-09. Epub 2009 Aug 28. Appl Environ Microbiol. 2009. PMID: 19717633 Free PMC article.

6

Ecological distribution and population physiology defined by proteomics in a natural microbial community.

Mueller RS, Denef VJ, Kalnejais LH, Suttle KB, Thomas BC, Wilmes P, Smith RL, Nordstrom DK, McCleskey RB, Shah MB, Verberkmoes NC, Hettich RL, Banfield JF. Mueller RS, et al. Among authors: shah mb. Mol Syst Biol. 2010 Jun 8;6:374. doi: 10.1038/msb.2010.30. Mol Syst Biol. 2010. PMID: 20531404 Free PMC article.

7

New group in the Leptospirillum clade: cultivation-independent community genomics, proteomics, and transcriptomics of the new species "Leptospirillum group IV UBA BS".

Goltsman DS, Dasari M, Thomas BC, Shah MB, VerBerkmoes NC, Hettich RL, Banfield JF. Goltsman DS, et al. Among authors: shah mb. Appl Environ Microbiol. 2013 Sep;79(17):5384-93. doi: 10.1128/AEM.00202-13. Epub 2013 May 3. Appl Environ Microbiol. 2013. PMID: 23645189 Free PMC article.

8

Community proteomics of a natural microbial biofilm.

Ram RJ, Verberkmoes NC, Thelen MP, Tyson GW, Baker BJ, Blake RC 2nd, Shah M, Hettich RL, Banfield JF. Ram RJ, et al. Science. 2005 Jun 24;308(5730):1915-20. Epub 2005 May 5. Science. 2005. PMID: 15879173

9

Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal.

Wilmes P, Andersson AF, Lefsrud MG, Wexler M, Shah M, Zhang B, Hettich RL, Bond PL, VerBerkmoes NC, Banfield JF. Wilmes P, et al. ISME J. 2008 Aug;2(8):853-64. doi: 10.1038/ismej.2008.38. Epub 2008 May 1. ISME J. 2008. PMID: 18449217 Free article.

10

Identification of biofilm matrix-associated proteins from an acid mine drainage microbial community.

Jiao Y, D'haeseleer P, Dill BD, Shah M, Verberkmoes NC, Hettich RL, Banfield JF, Thelen MP. Jiao Y, et al. Appl Environ Microbiol. 2011 Aug;77(15):5230-7. doi: 10.1128/AEM.03005-10. Epub 2011 Jun 17. Appl Environ Microbiol. 2011. PMID: 21685158 Free PMC article.

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