Zhang K - Search Results

1

Multiplex padlock targeted sequencing reveals human hypermutable CpG variations.

Li JB, Gao Y, Aach J, Zhang K, Kryukov GV, Xie B, Ahlford A, Yoon JK, Rosenbaum AM, Zaranek AW, LeProust E, Sunyaev SR, Church GM. Li JB, et al. Among authors: zhang k. Genome Res. 2009 Sep;19(9):1606-15. doi: 10.1101/gr.092213.109. Epub 2009 Jun 12. Genome Res. 2009. PMID: 19525355 Free PMC article.

2

Accurate multiplex polony sequencing of an evolved bacterial genome.

Shendure J, Porreca GJ, Reppas NB, Lin X, McCutcheon JP, Rosenbaum AM, Wang MD, Zhang K, Mitra RD, Church GM. Shendure J, et al. Among authors: zhang k. Science. 2005 Sep 9;309(5741):1728-32. doi: 10.1126/science.1117389. Epub 2005 Aug 4. Science. 2005. PMID: 16081699

3

Long-range polony haplotyping of individual human chromosome molecules.

Zhang K, Zhu J, Shendure J, Porreca GJ, Aach JD, Mitra RD, Church GM. Zhang K, et al. Nat Genet. 2006 Mar;38(3):382-7. doi: 10.1038/ng1741. Epub 2006 Feb 19. Nat Genet. 2006. PMID: 16493423

4

Sequencing genomes from single cells by polymerase cloning.

Zhang K, Martiny AC, Reppas NB, Barry KW, Malek J, Chisholm SW, Church GM. Zhang K, et al. Nat Biotechnol. 2006 Jun;24(6):680-6. doi: 10.1038/nbt1214. Epub 2006 May 28. Nat Biotechnol. 2006. PMID: 16732271

5

Multiplex amplification of large sets of human exons.

Porreca GJ, Zhang K, Li JB, Xie B, Austin D, Vassallo SL, LeProust EM, Peck BJ, Emig CJ, Dahl F, Gao Y, Church GM, Shendure J. Porreca GJ, et al. Among authors: zhang k. Nat Methods. 2007 Nov;4(11):931-6. doi: 10.1038/nmeth1110. Epub 2007 Oct 14. Nat Methods. 2007. PMID: 17934468

6

Targeted bisulfite sequencing reveals changes in DNA methylation associated with nuclear reprogramming.

Deng J, Shoemaker R, Xie B, Gore A, LeProust EM, Antosiewicz-Bourget J, Egli D, Maherali N, Park IH, Yu J, Daley GQ, Eggan K, Hochedlinger K, Thomson J, Wang W, Gao Y, Zhang K. Deng J, et al. Among authors: zhang k. Nat Biotechnol. 2009 Apr;27(4):353-60. doi: 10.1038/nbt.1530. Epub 2009 Mar 29. Nat Biotechnol. 2009. PMID: 19330000 Free PMC article.

7

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing.

Li JB, Levanon EY, Yoon JK, Aach J, Xie B, Leproust E, Zhang K, Gao Y, Church GM. Li JB, et al. Among authors: zhang k. Science. 2009 May 29;324(5931):1210-3. doi: 10.1126/science.1170995. Science. 2009. PMID: 19478186

8

Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human.

Zhang K, Li JB, Gao Y, Egli D, Xie B, Deng J, Li Z, Lee JH, Aach J, Leproust EM, Eggan K, Church GM. Zhang K, et al. Nat Methods. 2009 Aug;6(8):613-8. doi: 10.1038/nmeth.1357. Epub 2009 Jul 20. Nat Methods. 2009. PMID: 19620972 Free PMC article.

9

A robust approach to identifying tissue-specific gene expression regulatory variants using personalized human induced pluripotent stem cells.

Lee JH, Park IH, Gao Y, Li JB, Li Z, Daley GQ, Zhang K, Church GM. Lee JH, et al. Among authors: zhang k. PLoS Genet. 2009 Nov;5(11):e1000718. doi: 10.1371/journal.pgen.1000718. Epub 2009 Nov 13. PLoS Genet. 2009. PMID: 19911041 Free PMC article.

10

Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome.

Shoemaker R, Deng J, Wang W, Zhang K. Shoemaker R, et al. Among authors: zhang k. Genome Res. 2010 Jul;20(7):883-9. doi: 10.1101/gr.104695.109. Epub 2010 Apr 23. Genome Res. 2010. PMID: 20418490 Free PMC article.

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