Vaisman II - Search Results

1

Modeling the functional consequences of single residue replacements in bacteriophage f1 gene V protein.

Masso M, Mathe E, Parvez N, Hijazi K, Vaisman II. Masso M, et al. Among authors: vaisman ii. Protein Eng Des Sel. 2009 Nov;22(11):665-71. doi: 10.1093/protein/gzp050. Epub 2009 Aug 18. Protein Eng Des Sel. 2009. PMID: 19690089

2

Comprehensive mutagenesis of HIV-1 protease: a computational geometry approach.

Masso M, Vaisman II. Masso M, et al. Among authors: vaisman ii. Biochem Biophys Res Commun. 2003 May 30;305(2):322-6. doi: 10.1016/s0006-291x(03)00760-5. Biochem Biophys Res Commun. 2003. PMID: 12745077

3

Predicting the transactivation activity of p53 missense mutants using a four-body potential score derived from Delaunay tessellations.

Mathe E, Olivier M, Kato S, Ishioka C, Vaisman I, Hainaut P. Mathe E, et al. Hum Mutat. 2006 Feb;27(2):163-72. doi: 10.1002/humu.20284. Hum Mutat. 2006. PMID: 16395672

4

Computational mutagenesis studies of protein structure-function correlations.

Masso M, Lu Z, Vaisman II. Masso M, et al. Among authors: vaisman ii. Proteins. 2006 Jul 1;64(1):234-45. doi: 10.1002/prot.20968. Proteins. 2006. PMID: 16617425

5

Accurate prediction of enzyme mutant activity based on a multibody statistical potential.

Masso M, Vaisman II. Masso M, et al. Among authors: vaisman ii. Bioinformatics. 2007 Dec 1;23(23):3155-61. doi: 10.1093/bioinformatics/btm509. Epub 2007 Oct 31. Bioinformatics. 2007. PMID: 17977887

6

Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.

Barenboim M, Masso M, Vaisman II, Jamison DC. Barenboim M, et al. Among authors: vaisman ii. Proteins. 2008 Jun;71(4):1930-9. doi: 10.1002/prot.21838. Proteins. 2008. PMID: 18186470

7

Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis.

Masso M, Vaisman II. Masso M, et al. Among authors: vaisman ii. Bioinformatics. 2008 Sep 15;24(18):2002-9. doi: 10.1093/bioinformatics/btn353. Epub 2008 Jul 16. Bioinformatics. 2008. PMID: 18632749

8

AUTO-MUTE: web-based tools for predicting stability changes in proteins due to single amino acid replacements.

Masso M, Vaisman II. Masso M, et al. Among authors: vaisman ii. Protein Eng Des Sel. 2010 Aug;23(8):683-7. doi: 10.1093/protein/gzq042. Epub 2010 Jun 23. Protein Eng Des Sel. 2010. PMID: 20573719

9

Knowledge-based computational mutagenesis for predicting the disease potential of human non-synonymous single nucleotide polymorphisms.

Masso M, Vaisman II. Masso M, et al. Among authors: vaisman ii. J Theor Biol. 2010 Oct 21;266(4):560-8. doi: 10.1016/j.jtbi.2010.07.026. Epub 2010 Jul 23. J Theor Biol. 2010. PMID: 20655929

10

Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage.

Masso M, Vaisman II. Masso M, et al. Among authors: vaisman ii. BMC Bioinformatics. 2010 Oct 5;11:494. doi: 10.1186/1471-2105-11-494. BMC Bioinformatics. 2010. PMID: 20923564 Free PMC article.

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