Oliva B - Search Results

1

Biana: a software framework for compiling biological interactions and analyzing networks.

Garcia-Garcia J, Guney E, Aragues R, Planas-Iglesias J, Oliva B. Garcia-Garcia J, et al. Among authors: oliva b. BMC Bioinformatics. 2010 Jan 27;11:56. doi: 10.1186/1471-2105-11-56. BMC Bioinformatics. 2010. PMID: 20105306 Free PMC article.

2

Prediction of protein-protein interactions using distant conservation of sequence patterns and structure relationships.

Espadaler J, Romero-Isart O, Jackson RM, Oliva B. Espadaler J, et al. Among authors: oliva b. Bioinformatics. 2005 Aug 15;21(16):3360-8. doi: 10.1093/bioinformatics/bti522. Epub 2005 Jun 16. Bioinformatics. 2005. PMID: 15961445

3

Bcl-x(L)-mediated changes in metabolic pathways of breast cancer cells: from survival in the blood stream to organ-specific metastasis.

España L, Martín B, Aragüés R, Chiva C, Oliva B, Andreu D, Sierra A. España L, et al. Among authors: oliva b. Am J Pathol. 2005 Oct;167(4):1125-37. doi: 10.1016/S0002-9440(10)61201-1. Am J Pathol. 2005. PMID: 16192647 Free PMC article.

4

Underexpression of transcriptional regulators is common in metastatic breast cancer cells overexpressing Bcl-xL.

Méndez O, Martín B, Sanz R, Aragüés R, Moreno V, Oliva B, Stresing V, Sierra A. Méndez O, et al. Among authors: oliva b. Carcinogenesis. 2006 Jun;27(6):1169-79. doi: 10.1093/carcin/bgi363. Epub 2006 Feb 20. Carcinogenesis. 2006. PMID: 16492678

5

PIANA: protein interactions and network analysis.

Aragues R, Jaeggi D, Oliva B. Aragues R, et al. Among authors: oliva b. Bioinformatics. 2006 Apr 15;22(8):1015-7. doi: 10.1093/bioinformatics/btl072. Epub 2006 Mar 1. Bioinformatics. 2006. PMID: 16510498

6

Identification of function-associated loop motifs and application to protein function prediction.

Espadaler J, Querol E, Aviles FX, Oliva B. Espadaler J, et al. Among authors: oliva b. Bioinformatics. 2006 Sep 15;22(18):2237-43. doi: 10.1093/bioinformatics/btl382. Epub 2006 Jul 26. Bioinformatics. 2006. PMID: 16870939

7

Characterization of protein hubs by inferring interacting motifs from protein interactions.

Aragues R, Sali A, Bonet J, Marti-Renom MA, Oliva B. Aragues R, et al. Among authors: oliva b. PLoS Comput Biol. 2007 Sep;3(9):1761-71. doi: 10.1371/journal.pcbi.0030178. Epub 2007 Jul 30. PLoS Comput Biol. 2007. PMID: 17941705 Free PMC article.

8

Functional pathways shared by liver and lung metastases: a mitochondrial chaperone machine is up-regulated in soft-tissue breast cancer metastasis.

Sanz R, Aragüés R, Stresing V, Martín B, Landemaine T, Oliva B, Driouch K, Lidereau R, Sierra A. Sanz R, et al. Among authors: oliva b. Clin Exp Metastasis. 2007;24(8):673-83. doi: 10.1007/s10585-007-9124-4. Epub 2007 Nov 16. Clin Exp Metastasis. 2007. PMID: 18008173

9

Biological pathways contributing to organ-specific phenotype of brain metastatic cells.

Martín B, Aragüés R, Sanz R, Oliva B, Boluda S, Martínez A, Sierra A. Martín B, et al. Among authors: oliva b. J Proteome Res. 2008 Mar;7(3):908-20. doi: 10.1021/pr070426d. Epub 2008 Feb 8. J Proteome Res. 2008. PMID: 18257520

10

Topological comparison of methods for predicting transcriptional cooperativity in yeast.

Aguilar D, Oliva B. Aguilar D, et al. Among authors: oliva b. BMC Genomics. 2008 Mar 25;9:137. doi: 10.1186/1471-2164-9-137. BMC Genomics. 2008. PMID: 18366726 Free PMC article.

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