Harano Y - Search Results

1

Effects of side-chain packing on the formation of secondary structures in protein folding.

Yasuda S, Yoshidome T, Oshima H, Kodama R, Harano Y, Kinoshita M. Yasuda S, et al. Among authors: harano y. J Chem Phys. 2010 Feb 14;132(6):065105. doi: 10.1063/1.3319509. J Chem Phys. 2010. PMID: 20151761 Free article.

2

Translational-entropy gain of solvent upon protein folding.

Harano Y, Kinoshita M. Harano Y, et al. Biophys J. 2005 Oct;89(4):2701-10. doi: 10.1529/biophysj.104.057604. Epub 2005 Jul 29. Biophys J. 2005. PMID: 16055541 Free PMC article.

3

Pair-correlation entropy of hydrophobic hydration: decomposition into translational and orientational contributions and analysis of solute-size effects.

Kinoshita M, Matubayasi N, Harano Y, Nakahara M. Kinoshita M, et al. Among authors: harano y. J Chem Phys. 2006 Jan 14;124(2):024512. doi: 10.1063/1.2137708. J Chem Phys. 2006. PMID: 16422616 Free article.

4

Crucial importance of translational entropy of water in pressure denaturation of proteins.

Harano Y, Kinoshita M. Harano Y, et al. J Chem Phys. 2006 Jul 14;125(2):24910. doi: 10.1063/1.2217011. J Chem Phys. 2006. PMID: 16848614 Free article.

5

Changes in thermodynamic quantities upon contact of two solutes in solvent under isochoric and isobaric conditions.

Kinoshita M, Harano Y, Akiyama R. Kinoshita M, et al. Among authors: harano y. J Chem Phys. 2006 Dec 28;125(24):244504. doi: 10.1063/1.2403873. J Chem Phys. 2006. PMID: 17199352 Free article.

6

Theoretical analysis on changes in thermodynamic quantities upon protein folding: essential role of hydration.

Imai T, Harano Y, Kinoshita M, Kovalenko A, Hirata F. Imai T, et al. Among authors: harano y. J Chem Phys. 2007 Jun 14;126(22):225102. doi: 10.1063/1.2743962. J Chem Phys. 2007. PMID: 17581082

7

Molecular mechanism of pressure denaturation of proteins.

Harano Y, Yoshidome T, Kinoshita M. Harano Y, et al. J Chem Phys. 2008 Oct 14;129(14):145103. doi: 10.1063/1.2991176. J Chem Phys. 2008. PMID: 19045168

8

Pressure effects on structures formed by entropically driven self-assembly: illustration for denaturation of proteins.

Yoshidome T, Harano Y, Kinoshita M. Yoshidome T, et al. Among authors: harano y. Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jan;79(1 Pt 1):011912. doi: 10.1103/PhysRevE.79.011912. Epub 2009 Jan 20. Phys Rev E Stat Nonlin Soft Matter Phys. 2009. PMID: 19257074

9

Free-energy function based on an all-atom model for proteins.

Yoshidome T, Oda K, Harano Y, Roth R, Sugita Y, Ikeguchi M, Kinoshita M. Yoshidome T, et al. Among authors: harano y. Proteins. 2009 Dec;77(4):950-61. doi: 10.1002/prot.22520. Proteins. 2009. PMID: 19688821

10

Free-energy function for discriminating the native fold of a protein from misfolded decoys.

Yasuda S, Yoshidome T, Harano Y, Roth R, Oshima H, Oda K, Sugita Y, Ikeguchi M, Kinoshita M. Yasuda S, et al. Among authors: harano y. Proteins. 2011 Jul;79(7):2161-71. doi: 10.1002/prot.23036. Epub 2011 May 9. Proteins. 2011. PMID: 21557318 Free article.

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