Lund O - Search Results

1

MHC class II epitope predictive algorithms.

Nielsen M, Lund O, Buus S, Lundegaard C. Nielsen M, et al. Among authors: lund o. Immunology. 2010 Jul;130(3):319-28. doi: 10.1111/j.1365-2567.2010.03268.x. Epub 2010 Apr 12. Immunology. 2010. PMID: 20408898 Free PMC article. Review.

2

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations.

Nielsen M, Lundegaard C, Worning P, Lauemøller SL, Lamberth K, Buus S, Brunak S, Lund O. Nielsen M, et al. Among authors: lund o. Protein Sci. 2003 May;12(5):1007-17. doi: 10.1110/ps.0239403. Protein Sci. 2003. PMID: 12717023 Free PMC article.

3

Selecting informative data for developing peptide-MHC binding predictors using a query by committee approach.

Christensen JK, Lamberth K, Nielsen M, Lundegaard C, Worning P, Lauemøller SL, Buus S, Brunak S, Lund O. Christensen JK, et al. Among authors: lund o. Neural Comput. 2003 Dec;15(12):2931-42. doi: 10.1162/089976603322518803. Neural Comput. 2003. PMID: 14629874

4

Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach.

Nielsen M, Lundegaard C, Worning P, Hvid CS, Lamberth K, Buus S, Brunak S, Lund O. Nielsen M, et al. Among authors: lund o. Bioinformatics. 2004 Jun 12;20(9):1388-97. doi: 10.1093/bioinformatics/bth100. Epub 2004 Feb 12. Bioinformatics. 2004. PMID: 14962912

5

Definition of supertypes for HLA molecules using clustering of specificity matrices.

Lund O, Nielsen M, Kesmir C, Petersen AG, Lundegaard C, Worning P, Sylvester-Hvid C, Lamberth K, Røder G, Justesen S, Buus S, Brunak S. Lund O, et al. Immunogenetics. 2004 Mar;55(12):797-810. doi: 10.1007/s00251-004-0647-4. Epub 2004 Feb 13. Immunogenetics. 2004. PMID: 14963618

6

An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions.

Larsen MV, Lundegaard C, Lamberth K, Buus S, Brunak S, Lund O, Nielsen M. Larsen MV, et al. Among authors: lund o. Eur J Immunol. 2005 Aug;35(8):2295-303. doi: 10.1002/eji.200425811. Eur J Immunol. 2005. PMID: 15997466 Free article.

7

The validity of predicted T-cell epitopes.

Lundegaard C, Nielsen M, Lund O. Lundegaard C, et al. Among authors: lund o. Trends Biotechnol. 2006 Dec;24(12):537-8. doi: 10.1016/j.tibtech.2006.10.001. Epub 2006 Oct 12. Trends Biotechnol. 2006. PMID: 17045685

8

Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method.

Nielsen M, Lundegaard C, Lund O. Nielsen M, et al. Among authors: lund o. BMC Bioinformatics. 2007 Jul 4;8:238. doi: 10.1186/1471-2105-8-238. BMC Bioinformatics. 2007. PMID: 17608956 Free PMC article.

9

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence.

Nielsen M, Lundegaard C, Blicher T, Lamberth K, Harndahl M, Justesen S, Røder G, Peters B, Sette A, Lund O, Buus S. Nielsen M, et al. Among authors: lund o. PLoS One. 2007 Aug 29;2(8):e796. doi: 10.1371/journal.pone.0000796. PLoS One. 2007. PMID: 17726526 Free PMC article.

10

Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction.

Larsen MV, Lundegaard C, Lamberth K, Buus S, Lund O, Nielsen M. Larsen MV, et al. Among authors: lund o. BMC Bioinformatics. 2007 Oct 31;8:424. doi: 10.1186/1471-2105-8-424. BMC Bioinformatics. 2007. PMID: 17973982 Free PMC article.

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