Conrad TM - Search Results

1

BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions.

Schellenberger J, Park JO, Conrad TM, Palsson BØ. Schellenberger J, et al. Among authors: conrad tm. BMC Bioinformatics. 2010 Apr 29;11:213. doi: 10.1186/1471-2105-11-213. BMC Bioinformatics. 2010. PMID: 20426874 Free PMC article.

2

A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011.

Orth JD, Conrad TM, Na J, Lerman JA, Nam H, Feist AM, Palsson BØ. Orth JD, et al. Among authors: conrad tm. Mol Syst Biol. 2011 Oct 11;7:535. doi: 10.1038/msb.2011.65. Mol Syst Biol. 2011. PMID: 21988831 Free PMC article.

3

Genetic basis of growth adaptation of Escherichia coli after deletion of pgi, a major metabolic gene.

Charusanti P, Conrad TM, Knight EM, Venkataraman K, Fong NL, Xie B, Gao Y, Palsson BØ. Charusanti P, et al. Among authors: conrad tm. PLoS Genet. 2010 Nov 4;6(11):e1001186. doi: 10.1371/journal.pgen.1001186. PLoS Genet. 2010. PMID: 21079674 Free PMC article.

4

Microbial laboratory evolution in the era of genome-scale science.

Conrad TM, Lewis NE, Palsson BØ. Conrad TM, et al. Mol Syst Biol. 2011 Jul 5;7:509. doi: 10.1038/msb.2011.42. Mol Syst Biol. 2011. PMID: 21734648 Free PMC article. Review.

5

Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations.

Conrad TM, Joyce AR, Applebee MK, Barrett CL, Xie B, Gao Y, Palsson BØ. Conrad TM, et al. Genome Biol. 2009;10(10):R118. doi: 10.1186/gb-2009-10-10-r118. Epub 2009 Oct 22. Genome Biol. 2009. PMID: 19849850 Free PMC article.

6

Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models.

Lewis NE, Hixson KK, Conrad TM, Lerman JA, Charusanti P, Polpitiya AD, Adkins JN, Schramm G, Purvine SO, Lopez-Ferrer D, Weitz KK, Eils R, König R, Smith RD, Palsson BØ. Lewis NE, et al. Among authors: conrad tm. Mol Syst Biol. 2010 Jul;6:390. doi: 10.1038/msb.2010.47. Mol Syst Biol. 2010. PMID: 20664636 Free PMC article.

7

RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media.

Conrad TM, Frazier M, Joyce AR, Cho BK, Knight EM, Lewis NE, Landick R, Palsson BØ. Conrad TM, et al. Proc Natl Acad Sci U S A. 2010 Nov 23;107(47):20500-5. doi: 10.1073/pnas.0911253107. Epub 2010 Nov 5. Proc Natl Acad Sci U S A. 2010. PMID: 21057108 Free PMC article.

8

Functional and metabolic effects of adaptive glycerol kinase (GLPK) mutants in Escherichia coli.

Applebee MK, Joyce AR, Conrad TM, Pettigrew DW, Palsson BØ. Applebee MK, et al. Among authors: conrad tm. J Biol Chem. 2011 Jul 1;286(26):23150-9. doi: 10.1074/jbc.M110.195305. Epub 2011 May 6. J Biol Chem. 2011. PMID: 21550976 Free PMC article.

9

The role of cellular objectives and selective pressures in metabolic pathway evolution.

Nam H, Conrad TM, Lewis NE. Nam H, et al. Among authors: conrad tm. Curr Opin Biotechnol. 2011 Aug;22(4):595-600. doi: 10.1016/j.copbio.2011.03.006. Epub 2011 Apr 12. Curr Opin Biotechnol. 2011. PMID: 21481583 Free PMC article. Review.

10

Development of a system for discovery of genetic interactions for essential genes in Escherichia coli K-12.

Yong HT, Yamamoto N, Takeuchi R, Hsieh YJ, Conrad TM, Datsenko KA, Nakayashiki T, Wanner BL, Mori H. Yong HT, et al. Among authors: conrad tm. Genes Genet Syst. 2013;88(4):233-40. doi: 10.1266/ggs.88.233. Genes Genet Syst. 2013. PMID: 24463526 Free article.

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