Speed TP - Search Results

1

Poor prognosis in familial acute myeloid leukaemia with combined biallelic CEBPA mutations and downstream events affecting the ATM, FLT3 and CDX2 genes.

Carmichael CL, Wilkins EJ, Bengtsson H, Horwitz MS, Speed TP, Vincent PC, Young G, Hahn CN, Escher R, Scott HS. Carmichael CL, et al. Among authors: speed tp. Br J Haematol. 2010 Aug;150(3):382-5. doi: 10.1111/j.1365-2141.2010.08204.x. Epub 2010 Apr 29. Br J Haematol. 2010. PMID: 20456351 Free article. No abstract available.

2

Integrative analysis of RUNX1 downstream pathways and target genes.

Michaud J, Simpson KM, Escher R, Buchet-Poyau K, Beissbarth T, Carmichael C, Ritchie ME, Schütz F, Cannon P, Liu M, Shen X, Ito Y, Raskind WH, Horwitz MS, Osato M, Turner DR, Speed TP, Kavallaris M, Smyth GK, Scott HS. Michaud J, et al. Among authors: speed tp. BMC Genomics. 2008 Jul 31;9:363. doi: 10.1186/1471-2164-9-363. BMC Genomics. 2008. PMID: 18671852 Free PMC article.

3

A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods.

Bengtsson H, Ray A, Spellman P, Speed TP. Bengtsson H, et al. Among authors: speed tp. Bioinformatics. 2009 Apr 1;25(7):861-7. doi: 10.1093/bioinformatics/btp074. Epub 2009 Feb 4. Bioinformatics. 2009. PMID: 19193730 Free PMC article.

4

A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6.

Bengtsson H, Wirapati P, Speed TP. Bengtsson H, et al. Among authors: speed tp. Bioinformatics. 2009 Sep 1;25(17):2149-56. doi: 10.1093/bioinformatics/btp371. Epub 2009 Jun 17. Bioinformatics. 2009. PMID: 19535535 Free PMC article.

5

TumorBoost: normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays.

Bengtsson H, Neuvial P, Speed TP. Bengtsson H, et al. Among authors: speed tp. BMC Bioinformatics. 2010 May 12;11:245. doi: 10.1186/1471-2105-11-245. BMC Bioinformatics. 2010. PMID: 20462408 Free PMC article.

6

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data.

Carvalho B, Bengtsson H, Speed TP, Irizarry RA. Carvalho B, et al. Among authors: speed tp. Biostatistics. 2007 Apr;8(2):485-99. doi: 10.1093/biostatistics/kxl042. Epub 2006 Dec 22. Biostatistics. 2007. PMID: 17189563

7

Estimation and assessment of raw copy numbers at the single locus level.

Bengtsson H, Irizarry R, Carvalho B, Speed TP. Bengtsson H, et al. Among authors: speed tp. Bioinformatics. 2008 Mar 15;24(6):759-67. doi: 10.1093/bioinformatics/btn016. Epub 2008 Jan 19. Bioinformatics. 2008. PMID: 18204055

8

Statistical modeling of sequencing errors in SAGE libraries.

Beissbarth T, Hyde L, Smyth GK, Job C, Boon WM, Tan SS, Scott HS, Speed TP. Beissbarth T, et al. Among authors: speed tp. Bioinformatics. 2004 Aug 4;20 Suppl 1:i31-9. doi: 10.1093/bioinformatics/bth924. Bioinformatics. 2004. PMID: 15262778

9

An integrated genetic and functional analysis of the role of type II transmembrane serine proteases (TMPRSSs) in hearing loss.

Guipponi M, Toh MY, Tan J, Park D, Hanson K, Ballana E, Kwong D, Cannon PZ, Wu Q, Gout A, Delorenzi M, Speed TP, Smith RJ, Dahl HH, Petersen M, Teasdale RD, Estivill X, Park WJ, Scott HS. Guipponi M, et al. Among authors: speed tp. Hum Mutat. 2008 Jan;29(1):130-41. doi: 10.1002/humu.20617. Hum Mutat. 2008. PMID: 17918732

10

A DNA resequencing array for genes involved in Parkinson's disease.

Wilkins EJ, Rubio JP, Kotschet KE, Cowie TF, Boon WC, O'Hely M, Burfoot R, Wang W, Sue CM, Speed TP, Stankovitch J, Horne MK. Wilkins EJ, et al. Among authors: speed tp. Parkinsonism Relat Disord. 2012 May;18(4):386-90. doi: 10.1016/j.parkreldis.2011.12.012. Epub 2012 Jan 12. Parkinsonism Relat Disord. 2012. PMID: 22243833

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