Kaski S - Search Results

1

Multivariate multi-way analysis of multi-source data.

Huopaniemi I, Suvitaival T, Nikkilä J, Oresic M, Kaski S. Huopaniemi I, et al. Among authors: kaski s. Bioinformatics. 2010 Jun 15;26(12):i391-8. doi: 10.1093/bioinformatics/btq174. Bioinformatics. 2010. PMID: 20529933 Free PMC article.

2

Analysis and visualization of gene expression data using self-organizing maps.

Nikkilä J, Törönen P, Kaski S, Venna J, Castrén E, Wong G. Nikkilä J, et al. Among authors: kaski s. Neural Netw. 2002 Oct-Nov;15(8-9):953-66. doi: 10.1016/s0893-6080(02)00070-9. Neural Netw. 2002. PMID: 12416686

3

Trustworthiness and metrics in visualizing similarity of gene expression.

Kaski S, Nikkilä J, Oja M, Venna J, Törönen P, Castrén E. Kaski S, et al. BMC Bioinformatics. 2003 Oct 13;4:48. doi: 10.1186/1471-2105-4-48. BMC Bioinformatics. 2003. PMID: 14552657 Free PMC article.

4

Exploratory modeling of yeast stress response and its regulation with gCCA and associative clustering.

Nikkilä J, Roos C, Savia E, Kaski S. Nikkilä J, et al. Among authors: kaski s. Int J Neural Syst. 2005 Aug;15(4):237-46. doi: 10.1142/S0129065705000220. Int J Neural Syst. 2005. PMID: 16187400 Free article.

5

Associative clustering for exploring dependencies between functional genomics data sets.

Kaski S, Nikkilä J, Sinkkonen J, Lahti L, Knuuttila JE, Roos C. Kaski S, et al. IEEE/ACM Trans Comput Biol Bioinform. 2005 Jul-Sep;2(3):203-16. doi: 10.1109/TCBB.2005.32. IEEE/ACM Trans Comput Biol Bioinform. 2005. PMID: 17044184

6

Simple integrative preprocessing preserves what is shared in data sources.

Tripathi A, Klami A, Kaski S. Tripathi A, et al. Among authors: kaski s. BMC Bioinformatics. 2008 Feb 21;9:111. doi: 10.1186/1471-2105-9-111. BMC Bioinformatics. 2008. PMID: 18291027 Free PMC article.

7

Gender-dependent progression of systemic metabolic states in early childhood.

Nikkilä J, Sysi-Aho M, Ermolov A, Seppänen-Laakso T, Simell O, Kaski S, Oresic M. Nikkilä J, et al. Among authors: kaski s. Mol Syst Biol. 2008;4:197. doi: 10.1038/msb.2008.34. Epub 2008 Jun 3. Mol Syst Biol. 2008. PMID: 18523432 Free PMC article.

8

Probabilistic retrieval and visualization of biologically relevant microarray experiments.

Caldas J, Gehlenborg N, Faisal A, Brazma A, Kaski S. Caldas J, et al. Among authors: kaski s. Bioinformatics. 2009 Jun 15;25(12):i145-53. doi: 10.1093/bioinformatics/btp215. Bioinformatics. 2009. PMID: 19477980 Free PMC article.

9

Global modeling of transcriptional responses in interaction networks.

Lahti L, Knuuttila JE, Kaski S. Lahti L, et al. Among authors: kaski s. Bioinformatics. 2010 Nov 1;26(21):2713-20. doi: 10.1093/bioinformatics/btq500. Epub 2010 Sep 2. Bioinformatics. 2010. PMID: 20813878

10

Probabilistic analysis of probe reliability in differential gene expression studies with short oligonucleotide arrays.

Lahti L, Elo LL, Aittokallio T, Kaski S. Lahti L, et al. Among authors: kaski s. IEEE/ACM Trans Comput Biol Bioinform. 2011 Jan-Mar;8(1):217-25. doi: 10.1109/TCBB.2009.38. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 21071809

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