Bugrim A - Search Results

1

"Topological significance" analysis of gene expression and proteomic profiles from prostate cancer cells reveals key mechanisms of androgen response.

Vellaichamy A, Dezso Z, JeBailey L, Chinnaiyan AM, Sreekumar A, Nesvizhskii AI, Omenn GS, Bugrim A. Vellaichamy A, et al. Among authors: bugrim a. PLoS One. 2010 Jun 3;5(6):e10936. doi: 10.1371/journal.pone.0010936. PLoS One. 2010. PMID: 20532174 Free PMC article.

2

Identifying disease-specific genes based on their topological significance in protein networks.

Dezso Z, Nikolsky Y, Nikolskaya T, Miller J, Cherba D, Webb C, Bugrim A. Dezso Z, et al. Among authors: bugrim a. BMC Syst Biol. 2009 Mar 23;3:36. doi: 10.1186/1752-0509-3-36. BMC Syst Biol. 2009. PMID: 19309513 Free PMC article.

3

A comprehensive functional analysis of tissue specificity of human gene expression.

Dezso Z, Nikolsky Y, Sviridov E, Shi W, Serebriyskaya T, Dosymbekov D, Bugrim A, Rakhmatulin E, Brennan RJ, Guryanov A, Li K, Blake J, Samaha RR, Nikolskaya T. Dezso Z, et al. Among authors: bugrim a. BMC Biol. 2008 Nov 12;6:49. doi: 10.1186/1741-7007-6-49. BMC Biol. 2008. PMID: 19014478 Free PMC article.

4

Bimodal gene expression patterns in breast cancer.

Bessarabova M, Kirillov E, Shi W, Bugrim A, Nikolsky Y, Nikolskaya T. Bessarabova M, et al. Among authors: bugrim a. BMC Genomics. 2010 Feb 10;11 Suppl 1(Suppl 1):S8. doi: 10.1186/1471-2164-11-S1-S8. BMC Genomics. 2010. PMID: 20158879 Free PMC article.

5

Identification of interspecies concordance of mechanisms of arsenic-induced bladder cancer.

Sen B, Wolf DC, Turpaz Y, Bugrim A, Retief J, Hester SD. Sen B, et al. Among authors: bugrim a. Toxicol In Vitro. 2007 Dec;21(8):1513-29. doi: 10.1016/j.tiv.2007.06.021. Epub 2007 Jul 21. Toxicol In Vitro. 2007. PMID: 17720352

6

Early prediction of drug metabolism and toxicity: systems biology approach and modeling.

Bugrim A, Nikolskaya T, Nikolsky Y. Bugrim A, et al. Drug Discov Today. 2004 Feb 1;9(3):127-35. doi: 10.1016/S1359-6446(03)02971-4. Drug Discov Today. 2004. PMID: 14960390 Review.

7

Biological networks and analysis of experimental data in drug discovery.

Nikolsky Y, Nikolskaya T, Bugrim A. Nikolsky Y, et al. Among authors: bugrim a. Drug Discov Today. 2005 May 1;10(9):653-62. doi: 10.1016/S1359-6446(05)03420-3. Drug Discov Today. 2005. PMID: 15894230 Review.

8

Pathway mapping tools for analysis of high content data.

Ekins S, Nikolsky Y, Bugrim A, Kirillov E, Nikolskaya T. Ekins S, et al. Among authors: bugrim a. Methods Mol Biol. 2007;356:319-50. doi: 10.1385/1-59745-217-3:319. Methods Mol Biol. 2007. PMID: 16988414 Review.

9

Characteristics of genomic signatures derived using univariate methods and mechanistically anchored functional descriptors for predicting drug- and xenobiotic-induced nephrotoxicity.

Shi W, Bugrim A, Nikolsky Y, Nikolskya T, Brennan RJ. Shi W, et al. Among authors: bugrim a. Toxicol Mech Methods. 2008;18(2-3):267-76. doi: 10.1080/15376510701857072. Toxicol Mech Methods. 2008. PMID: 20020920

10

Computational prediction of human drug metabolism.

Ekins S, Andreyev S, Ryabov A, Kirillov E, Rakhmatulin EA, Bugrim A, Nikolskaya T. Ekins S, et al. Among authors: bugrim a. Expert Opin Drug Metab Toxicol. 2005 Aug;1(2):303-24. doi: 10.1517/17425255.1.2.303. Expert Opin Drug Metab Toxicol. 2005. PMID: 16922645 Review.

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