Lim YW - Search Results

1

TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets.

Schmieder R, Lim YW, Rohwer F, Edwards R. Schmieder R, et al. Among authors: lim yw. BMC Bioinformatics. 2010 Jun 23;11:341. doi: 10.1186/1471-2105-11-341. BMC Bioinformatics. 2010. PMID: 20573248 Free PMC article.

2

Identification and removal of ribosomal RNA sequences from metatranscriptomes.

Schmieder R, Lim YW, Edwards R. Schmieder R, et al. Among authors: lim yw. Bioinformatics. 2012 Feb 1;28(3):433-5. doi: 10.1093/bioinformatics/btr669. Epub 2011 Dec 6. Bioinformatics. 2012. PMID: 22155869 Free PMC article.

3

Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data.

Lim YW, Schmieder R, Haynes M, Furlan M, Matthews TD, Whiteson K, Poole SJ, Hayes CS, Low DA, Maughan H, Edwards R, Conrad D, Rohwer F. Lim YW, et al. PLoS One. 2013 May 30;8(5):e64285. doi: 10.1371/journal.pone.0064285. Print 2013. PLoS One. 2013. PMID: 23737977 Free PMC article.

4

Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis.

Lim YW, Evangelista JS 3rd, Schmieder R, Bailey B, Haynes M, Furlan M, Maughan H, Edwards R, Rohwer F, Conrad D. Lim YW, et al. J Clin Microbiol. 2014 Feb;52(2):425-37. doi: 10.1128/JCM.02204-13. Epub 2013 Nov 20. J Clin Microbiol. 2014. PMID: 24478471 Free PMC article.

5

Using viromes to predict novel immune proteins in non-model organisms.

Quistad SD, Lim YW, Silva GG, Nelson CE, Haas AF, Kelly LW, Edwards RA, Rohwer FL. Quistad SD, et al. Among authors: lim yw. Proc Biol Sci. 2016 Aug 31;283(1837):20161200. doi: 10.1098/rspb.2016.1200. Proc Biol Sci. 2016. PMID: 27581878 Free PMC article.

6

Spatial distribution of microbial communities in the cystic fibrosis lung.

Willner D, Haynes MR, Furlan M, Schmieder R, Lim YW, Rainey PB, Rohwer F, Conrad D. Willner D, et al. Among authors: lim yw. ISME J. 2012 Feb;6(2):471-4. doi: 10.1038/ismej.2011.104. Epub 2011 Jul 28. ISME J. 2012. PMID: 21796216 Free PMC article.

7

Metagenomics and metatranscriptomics: windows on CF-associated viral and microbial communities.

Lim YW, Schmieder R, Haynes M, Willner D, Furlan M, Youle M, Abbott K, Edwards R, Evangelista J, Conrad D, Rohwer F. Lim YW, et al. J Cyst Fibros. 2013 Mar;12(2):154-64. doi: 10.1016/j.jcf.2012.07.009. Epub 2012 Aug 28. J Cyst Fibros. 2013. PMID: 22951208 Free PMC article.

8

Identification of a novel human papillomavirus by metagenomic analysis of samples from patients with febrile respiratory illness.

Mokili JL, Dutilh BE, Lim YW, Schneider BS, Taylor T, Haynes MR, Metzgar D, Myers CA, Blair PJ, Nosrat B, Wolfe ND, Rohwer F. Mokili JL, et al. Among authors: lim yw. PLoS One. 2013;8(3):e58404. doi: 10.1371/journal.pone.0058404. Epub 2013 Mar 15. PLoS One. 2013. PMID: 23554892 Free PMC article. Clinical Trial.

9

Unraveling the unseen players in the ocean - a field guide to water chemistry and marine microbiology.

Haas AF, Knowles B, Lim YW, McDole Somera T, Kelly LW, Hatay M, Rohwer F. Haas AF, et al. Among authors: lim yw. J Vis Exp. 2014 Nov 5;(93):e52131. doi: 10.3791/52131. J Vis Exp. 2014. PMID: 25407983 Free PMC article.

10

Purifying the impure: sequencing metagenomes and metatranscriptomes from complex animal-associated samples.

Lim YW, Haynes M, Furlan M, Robertson CE, Harris JK, Rohwer F. Lim YW, et al. J Vis Exp. 2014 Dec 22;(94):52117. doi: 10.3791/52117. J Vis Exp. 2014. PMID: 25549184 Free PMC article.

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