Ohkubo T - Search Results

1

Cloning, expression, crystallization and preliminary X-ray crystallographic analysis of a human condensin SMC2 hinge domain with short coiled coils.

Kawahara K, Nakamura S, Katsu Y, Motooka D, Hosokawa Y, Kojima Y, Matsukawa K, Takinowaki H, Uchiyama S, Kobayashi Y, Fukui K, Ohkubo T. Kawahara K, et al. Among authors: ohkubo t. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Sep 1;66(Pt 9):1067-70. doi: 10.1107/S1744309110028721. Epub 2010 Aug 26. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010. PMID: 20823528 Free PMC article.

2

Crystallization and preliminary X-ray crystallographic studies of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly.

Nakano H, Uchiyama S, Yoshida T, Ohkubo T, Kato H, Yamagata Y, Kobayashi Y. Nakano H, et al. Among authors: ohkubo t. Acta Crystallogr D Biol Crystallogr. 2002 Jan;58(Pt 1):124-6. doi: 10.1107/s0907444901019941. Epub 2001 Dec 21. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 11752787

3

Solution structure of intracellular signal-transducing peptide derived from human beta(2)-adrenergic receptor.

Okuda A, Matsumoto O, Akaji M, Taga T, Ohkubo T, Kobayashi Y. Okuda A, et al. Among authors: ohkubo t. Biochem Biophys Res Commun. 2002 Mar 15;291(5):1297-301. doi: 10.1006/bbrc.2002.6606. Biochem Biophys Res Commun. 2002. PMID: 11883960

4

Structure and binding mode of a ribosome recycling factor (RRF) from mesophilic bacterium.

Nakano H, Yoshida T, Uchiyama S, Kawachi M, Matsuo H, Kato T, Ohshima A, Yamaichi Y, Honda T, Kato H, Yamagata Y, Ohkubo T, Kobayashi Y. Nakano H, et al. Among authors: ohkubo t. J Biol Chem. 2003 Jan 31;278(5):3427-36. doi: 10.1074/jbc.M208098200. Epub 2002 Oct 30. J Biol Chem. 2003. PMID: 12411440 Free article.

5

Characteristic domain motion in the ribosome recycling factor revealed by 15N NMR relaxation experiments and molecular dynamics simulations.

Yoshida T, Oka S, Uchiyama S, Nakano H, Kawasaki T, Ohkubo T, Kobayashi Y. Yoshida T, et al. Among authors: ohkubo t. Biochemistry. 2003 Apr 15;42(14):4101-7. doi: 10.1021/bi027191y. Biochemistry. 2003. PMID: 12680764

6

Characterization of collagen model peptides containing 4-fluoroproline; (4(S)-fluoroproline-pro-gly)10 forms a triple helix, but (4(R)-fluoroproline-pro-gly)10 does not.

Doi M, Nishi Y, Uchiyama S, Nishiuchi Y, Nakazawa T, Ohkubo T, Kobayashi Y. Doi M, et al. Among authors: ohkubo t. J Am Chem Soc. 2003 Aug 20;125(33):9922-3. doi: 10.1021/ja035997v. J Am Chem Soc. 2003. PMID: 12914445

7

Distributed computing and NMR constraint-based high-resolution structure determination: applied for bioactive Peptide endothelin-1 to determine C-terminal folding.

Takashima H, Mimura N, Ohkubo T, Yoshida T, Tamaoki H, Kobayashi Y. Takashima H, et al. Among authors: ohkubo t. J Am Chem Soc. 2004 Apr 14;126(14):4504-5. doi: 10.1021/ja031637w. J Am Chem Soc. 2004. PMID: 15070353

8

1H, 13C and 15N resonance assignments of the N-terminal 16 kDa domain of Escherichia coli Ada protein.

Takinowaki H, Matsuda Y, Yoshida T, Kobayashi Y, Ohkubo T. Takinowaki H, et al. Among authors: ohkubo t. J Biomol NMR. 2004 Jul;29(3):447-8. doi: 10.1023/B:JNMR.0000032549.04619.87. J Biomol NMR. 2004. PMID: 15213462 No abstract available.

9

Solution structure of ribosomal protein L16 from Thermus thermophilus HB8.

Nishimura M, Yoshida T, Shirouzu M, Terada T, Kuramitsu S, Yokoyama S, Ohkubo T, Kobayashi Y. Nishimura M, et al. Among authors: ohkubo t. J Mol Biol. 2004 Dec 10;344(5):1369-83. doi: 10.1016/j.jmb.2004.10.011. J Mol Biol. 2004. PMID: 15561149

10

NMR structure of transcription factor Sp1 DNA binding domain.

Oka S, Shiraishi Y, Yoshida T, Ohkubo T, Sugiura Y, Kobayashi Y. Oka S, et al. Among authors: ohkubo t. Biochemistry. 2004 Dec 28;43(51):16027-35. doi: 10.1021/bi048438p. Biochemistry. 2004. PMID: 15609997

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