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The Renal Gene Ontology Annotation Initiative.
Alam-Faruque Y, Dimmer EC, Huntley RP, O'Donovan C, Scambler P, Apweiler R. Alam-Faruque Y, et al. Among authors: dimmer ec. Organogenesis. 2010 Apr-Jun;6(2):71-5. doi: 10.4161/org.6.2.11294. Organogenesis. 2010. PMID: 20885853 Free PMC article. Review.
The UniProt-GO Annotation database in 2011.
Dimmer EC, Huntley RP, Alam-Faruque Y, Sawford T, O'Donovan C, Martin MJ, Bely B, Browne P, Mun Chan W, Eberhardt R, Gardner M, Laiho K, Legge D, Magrane M, Pichler K, Poggioli D, Sehra H, Auchincloss A, Axelsen K, Blatter MC, Boutet E, Braconi-Quintaje S, Breuza L, Bridge A, Coudert E, Estreicher A, Famiglietti L, Ferro-Rojas S, Feuermann M, Gos A, Gruaz-Gumowski N, Hinz U, Hulo C, James J, Jimenez S, Jungo F, Keller G, Lemercier P, Lieberherr D, Masson P, Moinat M, Pedruzzi I, Poux S, Rivoire C, Roechert B, Schneider M, Stutz A, Sundaram S, Tognolli M, Bougueleret L, Argoud-Puy G, Cusin I, Duek-Roggli P, Xenarios I, Apweiler R. Dimmer EC, et al. Nucleic Acids Res. 2012 Jan;40(Database issue):D565-70. doi: 10.1093/nar/gkr1048. Epub 2011 Nov 28. Nucleic Acids Res. 2012. PMID: 22123736 Free PMC article.
The impact of focused Gene Ontology curation of specific mammalian systems.
Alam-Faruque Y, Huntley RP, Khodiyar VK, Camon EB, Dimmer EC, Sawford T, Martin MJ, O'Donovan C, Talmud PJ, Scambler P, Apweiler R, Lovering RC. Alam-Faruque Y, et al. Among authors: dimmer ec. PLoS One. 2011;6(12):e27541. doi: 10.1371/journal.pone.0027541. Epub 2011 Dec 9. PLoS One. 2011. PMID: 22174742 Free PMC article.
Use of Gene Ontology Annotation to understand the peroxisome proteome in humans.
Mutowo-Meullenet P, Huntley RP, Dimmer EC, Alam-Faruque Y, Sawford T, Jesus Martin M, O'Donovan C, Apweiler R. Mutowo-Meullenet P, et al. Among authors: dimmer ec. Database (Oxford). 2013 Jan 17;2013:bas062. doi: 10.1093/database/bas062. Print 2013. Database (Oxford). 2013. PMID: 23327938 Free PMC article.
Representing kidney development using the gene ontology.
Alam-Faruque Y, Hill DP, Dimmer EC, Harris MA, Foulger RE, Tweedie S, Attrill H, Howe DG, Thomas SR, Davidson D, Woolf AS, Blake JA, Mungall CJ, O'Donovan C, Apweiler R, Huntley RP. Alam-Faruque Y, et al. Among authors: dimmer ec. PLoS One. 2014 Jun 18;9(6):e99864. doi: 10.1371/journal.pone.0099864. eCollection 2014. PLoS One. 2014. PMID: 24941002 Free PMC article.
An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.
Camon EB, Barrell DG, Dimmer EC, Lee V, Magrane M, Maslen J, Binns D, Apweiler R. Camon EB, et al. Among authors: dimmer ec. BMC Bioinformatics. 2005;6 Suppl 1(Suppl 1):S17. doi: 10.1186/1471-2105-6-S1-S17. Epub 2005 May 24. BMC Bioinformatics. 2005. PMID: 15960829 Free PMC article.
A method for increasing expressivity of Gene Ontology annotations using a compositional approach.
Huntley RP, Harris MA, Alam-Faruque Y, Blake JA, Carbon S, Dietze H, Dimmer EC, Foulger RE, Hill DP, Khodiyar VK, Lock A, Lomax J, Lovering RC, Mutowo-Meullenet P, Sawford T, Van Auken K, Wood V, Mungall CJ. Huntley RP, et al. Among authors: dimmer ec. BMC Bioinformatics. 2014 May 21;15:155. doi: 10.1186/1471-2105-15-155. BMC Bioinformatics. 2014. PMID: 24885854 Free PMC article.
30 results