Kim M - Search Results

1

Genomic and functional adaptation in surface ocean planktonic prokaryotes.

Yooseph S, Nealson KH, Rusch DB, McCrow JP, Dupont CL, Kim M, Johnson J, Montgomery R, Ferriera S, Beeson K, Williamson SJ, Tovchigrechko A, Allen AE, Zeigler LA, Sutton G, Eisenstadt E, Rogers YH, Friedman R, Frazier M, Venter JC. Yooseph S, et al. Among authors: kim m. Nature. 2010 Nov 4;468(7320):60-6. doi: 10.1038/nature09530. Nature. 2010. PMID: 21048761

2

Going deeper: metagenome of a hadopelagic microbial community.

Eloe EA, Fadrosh DW, Novotny M, Zeigler Allen L, Kim M, Lombardo MJ, Yee-Greenbaum J, Yooseph S, Allen EE, Lasken R, Williamson SJ, Bartlett DH. Eloe EA, et al. Among authors: kim m. PLoS One. 2011;6(5):e20388. doi: 10.1371/journal.pone.0020388. Epub 2011 May 24. PLoS One. 2011. PMID: 21629664 Free PMC article.

3

A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii.

Chan AP, Sutton G, DePew J, Krishnakumar R, Choi Y, Huang XZ, Beck E, Harkins DM, Kim M, Lesho EP, Nikolich MP, Fouts DE. Chan AP, et al. Among authors: kim m. Genome Biol. 2015 Jul 21;16(1):143. doi: 10.1186/s13059-015-0701-6. Genome Biol. 2015. PMID: 26195261 Free PMC article.

4

Acquisition and loss of virulence-associated factors during genome evolution and speciation in three clades of Bordetella species.

Linz B, Ivanov YV, Preston A, Brinkac L, Parkhill J, Kim M, Harris SR, Goodfield LL, Fry NK, Gorringe AR, Nicholson TL, Register KB, Losada L, Harvill ET. Linz B, et al. Among authors: kim m. BMC Genomics. 2016 Sep 30;17(1):767. doi: 10.1186/s12864-016-3112-5. BMC Genomics. 2016. PMID: 27716057 Free PMC article.

5

Araport: the Arabidopsis information portal.

Krishnakumar V, Hanlon MR, Contrino S, Ferlanti ES, Karamycheva S, Kim M, Rosen BD, Cheng CY, Moreira W, Mock SA, Stubbs J, Sullivan JM, Krampis K, Miller JR, Micklem G, Vaughn M, Town CD. Krishnakumar V, et al. Among authors: kim m. Nucleic Acids Res. 2015 Jan;43(Database issue):D1003-9. doi: 10.1093/nar/gku1200. Epub 2014 Nov 20. Nucleic Acids Res. 2015. PMID: 25414324 Free PMC article.

6

Genome sequencing and analysis of Yersina pestis KIM D27, an avirulent strain exempt from select agent regulation.

Losada L, Varga JJ, Hostetler J, Radune D, Kim M, Durkin S, Schneewind O, Nierman WC. Losada L, et al. Among authors: kim m. PLoS One. 2011 Apr 29;6(4):e19054. doi: 10.1371/journal.pone.0019054. PLoS One. 2011. PMID: 21559501 Free PMC article.

7

Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids.

Losada L, DebRoy C, Radune D, Kim M, Sanka R, Brinkac L, Kariyawasam S, Shelton D, Fratamico PM, Kapur V, Feng PC. Losada L, et al. Among authors: kim m. Plasmid. 2016 Jan;83:8-11. doi: 10.1016/j.plasmid.2015.12.001. Epub 2015 Dec 31. Plasmid. 2016. PMID: 26746359

8

Multidrug resistant pathogens respond differently to the presence of co-pathogen, commensal, probiotic and host cells.

Chan AP, Choi Y, Brinkac LM, Krishnakumar R, DePew J, Kim M, Hinkle MK, Lesho EP, Fouts DE. Chan AP, et al. Among authors: kim m. Sci Rep. 2018 Jun 5;8(1):8656. doi: 10.1038/s41598-018-26738-1. Sci Rep. 2018. PMID: 29872152 Free PMC article.

9

Genome Sequences of Nine Bordetella holmesii Strains Isolated in the United States.

Harvill ET, Goodfield LL, Ivanov Y, Smallridge WE, Meyer JA, Cassiday PK, Tondella ML, Brinkac L, Sanka R, Kim M, Losada L. Harvill ET, et al. Among authors: kim m. Genome Announc. 2014 Jun 19;2(3):e00438-14. doi: 10.1128/genomeA.00438-14. Genome Announc. 2014. PMID: 24948754 Free PMC article.

10

Draft Genome Sequences of 53 Genetically Distinct Isolates of Bordetella bronchiseptica Representing 11 Terrestrial and Aquatic Hosts.

Register KB, Ivanov YV, Jacobs N, Meyer JA, Goodfield LL, Muse SJ, Smallridge WE, Brinkac L, Kim M, Sanka R, Harvill ET, Losada L. Register KB, et al. Among authors: kim m. Genome Announc. 2015 Apr 23;3(2):e00152-15. doi: 10.1128/genomeA.00152-15. Genome Announc. 2015. PMID: 25908122 Free PMC article.

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