Orsi RH - Search Results

1

Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss.

den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M. den Bakker HC, et al. Among authors: orsi rh. BMC Genomics. 2010 Dec 2;11:688. doi: 10.1186/1471-2164-11-688. BMC Genomics. 2010. PMID: 21126366 Free PMC article.

2

Listeria monocytogenes internalins are highly diverse and evolved by recombination and positive selection.

Tsai YH, Orsi RH, Nightingale KK, Wiedmann M. Tsai YH, et al. Among authors: orsi rh. Infect Genet Evol. 2006 Sep;6(5):378-89. doi: 10.1016/j.meegid.2006.01.004. Epub 2006 Feb 10. Infect Genet Evol. 2006. PMID: 16473049

3

Recombination and positive selection contribute to evolution of Listeria monocytogenes inlA.

Orsi RH, Ripoll DR, Yeung M, Nightingale KK, Wiedmann M. Orsi RH, et al. Microbiology (Reading). 2007 Aug;153(Pt 8):2666-2678. doi: 10.1099/mic.0.2007/007310-0. Microbiology (Reading). 2007. PMID: 17660431 Free article.

4

Phenotypic and transcriptomic analyses demonstrate interactions between the transcriptional regulators CtsR and Sigma B in Listeria monocytogenes.

Hu Y, Raengpradub S, Schwab U, Loss C, Orsi RH, Wiedmann M, Boor KJ. Hu Y, et al. Among authors: orsi rh. Appl Environ Microbiol. 2007 Dec;73(24):7967-80. doi: 10.1128/AEM.01085-07. Epub 2007 Oct 12. Appl Environ Microbiol. 2007. PMID: 17933929 Free PMC article.

5

Transcriptomic and phenotypic analyses suggest a network between the transcriptional regulators HrcA and sigmaB in Listeria monocytogenes.

Hu Y, Oliver HF, Raengpradub S, Palmer ME, Orsi RH, Wiedmann M, Boor KJ. Hu Y, et al. Among authors: orsi rh. Appl Environ Microbiol. 2007 Dec;73(24):7981-91. doi: 10.1128/AEM.01281-07. Epub 2007 Oct 26. Appl Environ Microbiol. 2007. PMID: 17965207 Free PMC article.

6

Culture independent analysis of ileal mucosa reveals a selective increase in invasive Escherichia coli of novel phylogeny relative to depletion of Clostridiales in Crohn's disease involving the ileum.

Baumgart M, Dogan B, Rishniw M, Weitzman G, Bosworth B, Yantiss R, Orsi RH, Wiedmann M, McDonough P, Kim SG, Berg D, Schukken Y, Scherl E, Simpson KW. Baumgart M, et al. Among authors: orsi rh. ISME J. 2007 Sep;1(5):403-18. doi: 10.1038/ismej.2007.52. Epub 2007 Jul 12. ISME J. 2007. PMID: 18043660 Free article.

7

Lineage specific recombination and positive selection in coding and intragenic regions contributed to evolution of the main Listeria monocytogenes virulence gene cluster.

Orsi RH, Maron SB, Nightingale KK, Jerome M, Tabor H, Wiedmann M. Orsi RH, et al. Infect Genet Evol. 2008 Sep;8(5):566-76. doi: 10.1016/j.meegid.2008.04.006. Epub 2008 Apr 20. Infect Genet Evol. 2008. PMID: 18499533 Free PMC article.

8

Genome-wide analyses reveal lineage specific contributions of positive selection and recombination to the evolution of Listeria monocytogenes.

Orsi RH, Sun Q, Wiedmann M. Orsi RH, et al. BMC Evol Biol. 2008 Aug 12;8:233. doi: 10.1186/1471-2148-8-233. BMC Evol Biol. 2008. PMID: 18700032 Free PMC article.

9

Short-term genome evolution of Listeria monocytogenes in a non-controlled environment.

Orsi RH, Borowsky ML, Lauer P, Young SK, Nusbaum C, Galagan JE, Birren BW, Ivy RA, Sun Q, Graves LM, Swaminathan B, Wiedmann M. Orsi RH, et al. BMC Genomics. 2008 Nov 13;9:539. doi: 10.1186/1471-2164-9-539. BMC Genomics. 2008. PMID: 19014550 Free PMC article.

10

Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest.

Graves LM, Helsel LO, Steigerwalt AG, Morey RE, Daneshvar MI, Roof SE, Orsi RH, Fortes ED, Milillo SR, den Bakker HC, Wiedmann M, Swaminathan B, Sauders BD. Graves LM, et al. Among authors: orsi rh. Int J Syst Evol Microbiol. 2010 Jun;60(Pt 6):1280-1288. doi: 10.1099/ijs.0.014118-0. Epub 2009 Aug 10. Int J Syst Evol Microbiol. 2010. PMID: 19667380

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