Smith ZD - Search Results

1

Reprogramming factor expression initiates widespread targeted chromatin remodeling.

Koche RP, Smith ZD, Adli M, Gu H, Ku M, Gnirke A, Bernstein BE, Meissner A. Koche RP, et al. Among authors: smith zd. Cell Stem Cell. 2011 Jan 7;8(1):96-105. doi: 10.1016/j.stem.2010.12.001. Cell Stem Cell. 2011. PMID: 21211784 Free PMC article.

2

High-throughput bisulfite sequencing in mammalian genomes.

Smith ZD, Gu H, Bock C, Gnirke A, Meissner A. Smith ZD, et al. Methods. 2009 Jul;48(3):226-32. doi: 10.1016/j.ymeth.2009.05.003. Epub 2009 May 12. Methods. 2009. PMID: 19442738 Free PMC article.

3

Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses.

Amit I, Garber M, Chevrier N, Leite AP, Donner Y, Eisenhaure T, Guttman M, Grenier JK, Li W, Zuk O, Schubert LA, Birditt B, Shay T, Goren A, Zhang X, Smith Z, Deering R, McDonald RC, Cabili M, Bernstein BE, Rinn JL, Meissner A, Root DE, Hacohen N, Regev A. Amit I, et al. Science. 2009 Oct 9;326(5950):257-63. doi: 10.1126/science.1179050. Epub 2009 Sep 3. Science. 2009. PMID: 19729616 Free PMC article.

4

Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution.

Gu H, Bock C, Mikkelsen TS, Jäger N, Smith ZD, Tomazou E, Gnirke A, Lander ES, Meissner A. Gu H, et al. Among authors: smith zd. Nat Methods. 2010 Feb;7(2):133-6. doi: 10.1038/nmeth.1414. Epub 2010 Jan 10. Nat Methods. 2010. PMID: 20062050 Free PMC article.

5

Dynamic single-cell imaging of direct reprogramming reveals an early specifying event.

Smith ZD, Nachman I, Regev A, Meissner A. Smith ZD, et al. Nat Biotechnol. 2010 May;28(5):521-6. doi: 10.1038/nbt.1632. Epub 2010 May 2. Nat Biotechnol. 2010. PMID: 20436460 Free PMC article.

6

Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA.

Warren L, Manos PD, Ahfeldt T, Loh YH, Li H, Lau F, Ebina W, Mandal PK, Smith ZD, Meissner A, Daley GQ, Brack AS, Collins JJ, Cowan C, Schlaeger TM, Rossi DJ. Warren L, et al. Among authors: smith zd. Cell Stem Cell. 2010 Nov 5;7(5):618-30. doi: 10.1016/j.stem.2010.08.012. Epub 2010 Sep 30. Cell Stem Cell. 2010. PMID: 20888316 Free PMC article.

7

Reference Maps of human ES and iPS cell variation enable high-throughput characterization of pluripotent cell lines.

Bock C, Kiskinis E, Verstappen G, Gu H, Boulting G, Smith ZD, Ziller M, Croft GF, Amoroso MW, Oakley DH, Gnirke A, Eggan K, Meissner A. Bock C, et al. Among authors: smith zd. Cell. 2011 Feb 4;144(3):439-52. doi: 10.1016/j.cell.2010.12.032. Cell. 2011. PMID: 21295703 Free PMC article.

8

Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling.

Gu H, Smith ZD, Bock C, Boyle P, Gnirke A, Meissner A. Gu H, et al. Among authors: smith zd. Nat Protoc. 2011 Apr;6(4):468-81. doi: 10.1038/nprot.2010.190. Epub 2011 Mar 18. Nat Protoc. 2011. PMID: 21412275

9

Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci.

Zacharek SJ, Fillmore CM, Lau AN, Gludish DW, Chou A, Ho JW, Zamponi R, Gazit R, Bock C, Jäger N, Smith ZD, Kim TM, Saunders AH, Wong J, Lee JH, Roach RR, Rossi DJ, Meissner A, Gimelbrant AA, Park PJ, Kim CF. Zacharek SJ, et al. Among authors: smith zd. Cell Stem Cell. 2011 Sep 2;9(3):272-81. doi: 10.1016/j.stem.2011.07.007. Cell Stem Cell. 2011. PMID: 21885022 Free PMC article.

10

Epigenomics and chromatin dynamics.

Akopian V, Chan MM, Clement K, Galonska C, Gifford CA, Lehtola E, Liao J, Samavarchi-Tehrani P, Sindhu C, Smith ZD, Tsankov AM, Webster J, Zhang Y, Ziller MJ, Meissner A. Akopian V, et al. Among authors: smith zd. Genome Biol. 2012 Feb 24;13(2):313. doi: 10.1186/gb-2012-13-2-313. Genome Biol. 2012. PMID: 22364154 Free PMC article.

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