Diehl AG - Search Results

1

Multiple sequence-specific DNA-binding proteins mediate estrogen receptor signaling through a tethering pathway.

Heldring N, Isaacs GD, Diehl AG, Sun M, Cheung E, Ranish JA, Kraus WL. Heldring N, et al. Among authors: diehl ag. Mol Endocrinol. 2011 Apr;25(4):564-74. doi: 10.1210/me.2010-0425. Epub 2011 Feb 17. Mol Endocrinol. 2011. PMID: 21330404 Free PMC article.

2

Genomic analyses of transcription factor binding, histone acetylation, and gene expression reveal mechanistically distinct classes of estrogen-regulated promoters.

Kininis M, Chen BS, Diehl AG, Isaacs GD, Zhang T, Siepel AC, Clark AG, Kraus WL. Kininis M, et al. Among authors: diehl ag. Mol Cell Biol. 2007 Jul;27(14):5090-104. doi: 10.1128/MCB.00083-07. Epub 2007 May 21. Mol Cell Biol. 2007. PMID: 17515612 Free PMC article.

3

Conserved and species-specific transcription factor co-binding patterns drive divergent gene regulation in human and mouse.

Diehl AG, Boyle AP. Diehl AG, et al. Nucleic Acids Res. 2018 Feb 28;46(4):1878-1894. doi: 10.1093/nar/gky018. Nucleic Acids Res. 2018. PMID: 29361190 Free PMC article.

4

Deciphering ENCODE.

Diehl AG, Boyle AP. Diehl AG, et al. Trends Genet. 2016 Apr;32(4):238-249. doi: 10.1016/j.tig.2016.02.002. Epub 2016 Mar 5. Trends Genet. 2016. PMID: 26962025 Review.

5

Transposable elements contribute to cell and species-specific chromatin looping and gene regulation in mammalian genomes.

Diehl AG, Ouyang N, Boyle AP. Diehl AG, et al. Nat Commun. 2020 Apr 14;11(1):1796. doi: 10.1038/s41467-020-15520-5. Nat Commun. 2020. PMID: 32286261 Free PMC article.

6

CGIMP: Real-time exploration and covariate projection for self-organizing map datasets.

Diehl AG, Boyle AP. Diehl AG, et al. J Open Source Softw. 2019;4(39):1520. doi: 10.21105/joss.01520. Epub 2019 Jul 10. J Open Source Softw. 2019. PMID: 32500114 Free PMC article. No abstract available.

7

MapGL: inferring evolutionary gain and loss of short genomic sequence features by phylogenetic maximum parsimony.

Diehl AG, Boyle AP. Diehl AG, et al. BMC Bioinformatics. 2020 Sep 22;21(1):416. doi: 10.1186/s12859-020-03742-9. BMC Bioinformatics. 2020. PMID: 32962625 Free PMC article.

8

Extraocular muscle morphogenesis and gene expression are regulated by Pitx2 gene dose.

Diehl AG, Zareparsi S, Qian M, Khanna R, Angeles R, Gage PJ. Diehl AG, et al. Invest Ophthalmol Vis Sci. 2006 May;47(5):1785-93. doi: 10.1167/iovs.05-1424. Invest Ophthalmol Vis Sci. 2006. PMID: 16638982

9

Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse protamine 1.

Moritz L, Schon SB, Rabbani M, Sheng Y, Agrawal R, Glass-Klaiber J, Sultan C, Camarillo JM, Clements J, Baldwin MR, Diehl AG, Boyle AP, O'Brien PJ, Ragunathan K, Hu YC, Kelleher NL, Nandakumar J, Li JZ, Orwig KE, Redding S, Hammoud SS. Moritz L, et al. Among authors: diehl ag. Nat Struct Mol Biol. 2023 Aug;30(8):1077-1091. doi: 10.1038/s41594-023-01033-4. Epub 2023 Jul 17. Nat Struct Mol Biol. 2023. PMID: 37460896 Free PMC article.

10

HaplotagLR: An efficient and configurable utility for haplotagging long reads.

Holmes MJ, Mahjour B, Castro CP, Farnum GA, Diehl AG, Boyle AP. Holmes MJ, et al. Among authors: diehl ag. PLoS One. 2024 Mar 13;19(3):e0298688. doi: 10.1371/journal.pone.0298688. eCollection 2024. PLoS One. 2024. PMID: 38478504 Free PMC article.

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