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Page 1
Cactus: Algorithms for genome multiple sequence alignment.
Paten B, Earl D, Nguyen N, Diekhans M, Zerbino D, Haussler D. Paten B, et al. Among authors: haussler d. Genome Res. 2011 Sep;21(9):1512-28. doi: 10.1101/gr.123356.111. Epub 2011 Jun 10. Genome Res. 2011. PMID: 21665927 Free PMC article.
A probabilistic approach to consensus multiple alignment.
Lazareva-Ulitsky B, Haussler D. Lazareva-Ulitsky B, et al. Among authors: haussler d. Pac Symp Biocomput. 1999:150-61. doi: 10.1142/9789814447300_0015. Pac Symp Biocomput. 1999. PMID: 10380193 Free article.
The UCSC Genome Browser Database.
Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ, Weber RJ, Haussler D, Kent WJ; University of California Santa Cruz. Karolchik D, et al. Among authors: haussler d. Nucleic Acids Res. 2003 Jan 1;31(1):51-4. doi: 10.1093/nar/gkg129. Nucleic Acids Res. 2003. PMID: 12519945 Free PMC article.
The UCSC Genome Browser Database: update 2006.
Hinrichs AS, Karolchik D, Baertsch R, Barber GP, Bejerano G, Clawson H, Diekhans M, Furey TS, Harte RA, Hsu F, Hillman-Jackson J, Kuhn RM, Pedersen JS, Pohl A, Raney BJ, Rosenbloom KR, Siepel A, Smith KE, Sugnet CW, Sultan-Qurraie A, Thomas DJ, Trumbower H, Weber RJ, Weirauch M, Zweig AS, Haussler D, Kent WJ. Hinrichs AS, et al. Among authors: haussler d. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D590-8. doi: 10.1093/nar/gkj144. Nucleic Acids Res. 2006. PMID: 16381938 Free PMC article.
The UCSC Known Genes.
Hsu F, Kent WJ, Clawson H, Kuhn RM, Diekhans M, Haussler D. Hsu F, et al. Among authors: haussler d. Bioinformatics. 2006 May 1;22(9):1036-46. doi: 10.1093/bioinformatics/btl048. Epub 2006 Feb 24. Bioinformatics. 2006. PMID: 16500937
Reconstructing contiguous regions of an ancestral genome.
Ma J, Zhang L, Suh BB, Raney BJ, Burhans RC, Kent WJ, Blanchette M, Haussler D, Miller W. Ma J, et al. Among authors: haussler d. Genome Res. 2006 Dec;16(12):1557-65. doi: 10.1101/gr.5383506. Epub 2006 Sep 18. Genome Res. 2006. PMID: 16983148 Free PMC article.
410 results