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Page 1
A whole-genome single nucleotide polymorphism-based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo pulsed-field gel electrophoresis type.
Bakker HC, Switt AI, Cummings CA, Hoelzer K, Degoricija L, Rodriguez-Rivera LD, Wright EM, Fang R, Davis M, Root T, Schoonmaker-Bopp D, Musser KA, Villamil E, Waechter H, Kornstein L, Furtado MR, Wiedmann M. Bakker HC, et al. Among authors: degoricija l. Appl Environ Microbiol. 2011 Dec;77(24):8648-55. doi: 10.1128/AEM.06538-11. Epub 2011 Oct 14. Appl Environ Microbiol. 2011. PMID: 22003026 Free PMC article.
Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica.
den Bakker HC, Moreno Switt AI, Govoni G, Cummings CA, Ranieri ML, Degoricija L, Hoelzer K, Rodriguez-Rivera LD, Brown S, Bolchacova E, Furtado MR, Wiedmann M. den Bakker HC, et al. Among authors: degoricija l. BMC Genomics. 2011 Aug 22;12:425. doi: 10.1186/1471-2164-12-425. BMC Genomics. 2011. PMID: 21859443 Free PMC article.
Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission.
Moreno Switt AI, den Bakker HC, Cummings CA, Rodriguez-Rivera LD, Govoni G, Raneiri ML, Degoricija L, Brown S, Hoelzer K, Peters JE, Bolchacova E, Furtado MR, Wiedmann M. Moreno Switt AI, et al. Among authors: degoricija l. PLoS One. 2012;7(7):e41247. doi: 10.1371/journal.pone.0041247. Epub 2012 Jul 20. PLoS One. 2012. PMID: 22911766 Free PMC article.
Comparative analysis of genome sequences covering the seven cronobacter species.
Joseph S, Desai P, Ji Y, Cummings CA, Shih R, Degoricija L, Rico A, Brzoska P, Hamby SE, Masood N, Hariri S, Sonbol H, Chuzhanova N, McClelland M, Furtado MR, Forsythe SJ. Joseph S, et al. Among authors: degoricija l. PLoS One. 2012;7(11):e49455. doi: 10.1371/journal.pone.0049455. Epub 2012 Nov 16. PLoS One. 2012. PMID: 23166675 Free PMC article.
Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage.
Kyle JL, Cummings CA, Parker CT, Quiñones B, Vatta P, Newton E, Huynh S, Swimley M, Degoricija L, Barker M, Fontanoz S, Nguyen K, Patel R, Fang R, Tebbs R, Petrauskene O, Furtado M, Mandrell RE. Kyle JL, et al. Among authors: degoricija l. J Bacteriol. 2012 Apr;194(8):1885-96. doi: 10.1128/JB.00120-12. Epub 2012 Feb 10. J Bacteriol. 2012. PMID: 22328665 Free PMC article.
Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction.
Siew K, Nestler KA, Nelson C, D'Ambrosio V, Zhong C, Li Z, Grillo A, Wan ER, Patel V, Overbey E, Kim J, Yun S, Vaughan MB, Cheshire C, Cubitt L, Broni-Tabi J, Al-Jaber MY, Boyko V, Meydan C, Barker P, Arif S, Afsari F, Allen N, Al-Maadheed M, Altinok S, Bah N, Border S, Brown AL, Burling K, Cheng-Campbell M, Colón LM, Degoricija L, Figg N, Finch R, Foox J, Faridi P, French A, Gebre S, Gordon P, Houerbi N, Valipour Kahrood H, Kiffer FC, Klosinska AS, Kubik A, Lee HC, Li Y, Lucarelli N, Marullo AL, Matei I, McCann CM, Mimar S, Naglah A, Nicod J, O'Shaughnessy KM, Oliveira LC, Oswalt L, Patras LI, Lai Polo SH, Rodríguez-Lopez M, Roufosse C, Sadeghi-Alavijeh O, Sanchez-Hodge R, Paul AS, Schittenhelm RB, Schweickart A, Scott RT, Choy Lim Kam Sian TC, da Silveira WA, Slawinski H, Snell D, Sosa J, Saravia-Butler AM, Tabetah M, Tanuwidjaya E, Walker-Samuel S, Yang X, Yasmin, Zhang H, Godovac-Zimmermann J, Sarder P, Sanders LM, Costes SV, Campbell RAA, Karouia F, Mohamed-Alis V, Rodriques S, Lynham S, Steele JR, Baranzini S, Fazelinia H, Dai Z, Uruno A, Shiba D, Yamamoto M, A C Almeida E, Blaber E, Schisler JC, Eisch AJ, Muratani M, Zwart SR, Smith SM, Galazka JM, Mason CE, Beheshti… See abstract for full author list ➔ Siew K, et al. Among authors: degoricija l. Nat Commun. 2024 Jun 11;15(1):4923. doi: 10.1038/s41467-024-49212-1. Nat Commun. 2024. PMID: 38862484 Free PMC article.
A New Era for Space Life Science: International Standards for Space Omics Processing.
Rutter L, Barker R, Bezdan D, Cope H, Costes SV, Degoricija L, Fisch KM, Gabitto MI, Gebre S, Giacomello S, Gilroy S, Green SJ, Mason CE, Reinsch SS, Szewczyk NJ, Taylor DM, Galazka JM, Herranz R, Muratani M. Rutter L, et al. Among authors: degoricija l. Patterns (N Y). 2020 Nov 25;1(9):100148. doi: 10.1016/j.patter.2020.100148. eCollection 2020 Dec 11. Patterns (N Y). 2020. PMID: 33336201 Free PMC article. Review.
12 results