Mokry M - Search Results

1

Primary colorectal cancers and their subsequent hepatic metastases are genetically different: implications for selection of patients for targeted treatment.

Vermaat JS, Nijman IJ, Koudijs MJ, Gerritse FL, Scherer SJ, Mokry M, Roessingh WM, Lansu N, de Bruijn E, van Hillegersberg R, van Diest PJ, Cuppen E, Voest EE. Vermaat JS, et al. Among authors: mokry m. Clin Cancer Res. 2012 Feb 1;18(3):688-99. doi: 10.1158/1078-0432.CCR-11-1965. Epub 2011 Dec 15. Clin Cancer Res. 2012. PMID: 22173549

2

The Atp1a1 gene from inbred Dahl salt sensitive rats does not contain the A1079T missense transversion.

Mokry M, Cuppen E. Mokry M, et al. Hypertension. 2008 Apr;51(4):922-7. doi: 10.1161/HYPERTENSIONAHA.107.108415. Epub 2008 Feb 19. Hypertension. 2008. PMID: 18285611

3

Accurate SNP and mutation detection by targeted custom microarray-based genomic enrichment of short-fragment sequencing libraries.

Mokry M, Feitsma H, Nijman IJ, de Bruijn E, van der Zaag PJ, Guryev V, Cuppen E. Mokry M, et al. Nucleic Acids Res. 2010 Jun;38(10):e116. doi: 10.1093/nar/gkq072. Epub 2010 Feb 17. Nucleic Acids Res. 2010. PMID: 20164091 Free PMC article.

4

Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq.

Johannes F, Wardenaar R, Colomé-Tatché M, Mousson F, de Graaf P, Mokry M, Guryev V, Timmers HT, Cuppen E, Jansen RC. Johannes F, et al. Among authors: mokry m. Bioinformatics. 2010 Apr 15;26(8):1000-6. doi: 10.1093/bioinformatics/btq087. Epub 2010 Mar 5. Bioinformatics. 2010. PMID: 20208068 Free article.

5

Mutation discovery by targeted genomic enrichment of multiplexed barcoded samples.

Nijman IJ, Mokry M, van Boxtel R, Toonen P, de Bruijn E, Cuppen E. Nijman IJ, et al. Among authors: mokry m. Nat Methods. 2010 Nov;7(11):913-5. doi: 10.1038/nmeth.1516. Epub 2010 Oct 17. Nat Methods. 2010. PMID: 20953175

6

Efficient double fragmentation ChIP-seq provides nucleotide resolution protein-DNA binding profiles.

Mokry M, Hatzis P, de Bruijn E, Koster J, Versteeg R, Schuijers J, van de Wetering M, Guryev V, Clevers H, Cuppen E. Mokry M, et al. PLoS One. 2010 Nov 30;5(11):e15092. doi: 10.1371/journal.pone.0015092. PLoS One. 2010. PMID: 21152096 Free PMC article.

7

Genomic DNA pooling strategy for next-generation sequencing-based rare variant discovery in abdominal aortic aneurysm regions of interest-challenges and limitations.

Harakalova M, Nijman IJ, Medic J, Mokry M, Renkens I, Blankensteijn JD, Kloosterman W, Baas AF, Cuppen E. Harakalova M, et al. Among authors: mokry m. J Cardiovasc Transl Res. 2011 Jun;4(3):271-80. doi: 10.1007/s12265-011-9263-5. Epub 2011 Mar 1. J Cardiovasc Transl Res. 2011. PMID: 21360310 Free PMC article.

8

Identification of factors required for meristem function in Arabidopsis using a novel next generation sequencing fast forward genetics approach.

Mokry M, Nijman IJ, van Dijken A, Benjamins R, Heidstra R, Scheres B, Cuppen E. Mokry M, et al. BMC Genomics. 2011 May 20;12:256. doi: 10.1186/1471-2164-12-256. BMC Genomics. 2011. PMID: 21599977 Free PMC article.

9

Integrated genome-wide analysis of transcription factor occupancy, RNA polymerase II binding and steady-state RNA levels identify differentially regulated functional gene classes.

Mokry M, Hatzis P, Schuijers J, Lansu N, Ruzius FP, Clevers H, Cuppen E. Mokry M, et al. Nucleic Acids Res. 2012 Jan;40(1):148-58. doi: 10.1093/nar/gkr720. Epub 2011 Sep 13. Nucleic Acids Res. 2012. PMID: 21914722 Free PMC article.

10

Multiplexed array-based and in-solution genomic enrichment for flexible and cost-effective targeted next-generation sequencing.

Harakalova M, Mokry M, Hrdlickova B, Renkens I, Duran K, van Roekel H, Lansu N, van Roosmalen M, de Bruijn E, Nijman IJ, Kloosterman WP, Cuppen E. Harakalova M, et al. Among authors: mokry m. Nat Protoc. 2011 Nov 3;6(12):1870-86. doi: 10.1038/nprot.2011.396. Nat Protoc. 2011. PMID: 22051800

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