Bork P - Search Results

1

Assessment of metagenomic assembly using simulated next generation sequencing data.

Mende DR, Waller AS, Sunagawa S, Järvelin AI, Chan MM, Arumugam M, Raes J, Bork P. Mende DR, et al. Among authors: bork p. PLoS One. 2012;7(2):e31386. doi: 10.1371/journal.pone.0031386. Epub 2012 Feb 23. PLoS One. 2012. PMID: 22384016 Free PMC article.

2

SMART 4.0: towards genomic data integration.

Letunic I, Copley RR, Schmidt S, Ciccarelli FD, Doerks T, Schultz J, Ponting CP, Bork P. Letunic I, et al. Among authors: bork p. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D142-4. doi: 10.1093/nar/gkh088. Nucleic Acids Res. 2004. PMID: 14681379 Free PMC article.

3

Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets.

Rehwinkel J, Letunic I, Raes J, Bork P, Izaurralde E. Rehwinkel J, et al. Among authors: bork p. RNA. 2005 Oct;11(10):1530-44. doi: 10.1261/rna.2160905. RNA. 2005. PMID: 16199763 Free PMC article.

4

Prediction of effective genome size in metagenomic samples.

Raes J, Korbel JO, Lercher MJ, von Mering C, Bork P. Raes J, et al. Among authors: bork p. Genome Biol. 2007;8(1):R10. doi: 10.1186/gb-2007-8-1-r10. Genome Biol. 2007. PMID: 17224063 Free PMC article.

5

Quantitative phylogenetic assessment of microbial communities in diverse environments.

von Mering C, Hugenholtz P, Raes J, Tringe SG, Doerks T, Jensen LJ, Ward N, Bork P. von Mering C, et al. Among authors: bork p. Science. 2007 Feb 23;315(5815):1126-30. doi: 10.1126/science.1133420. Epub 2007 Feb 1. Science. 2007. PMID: 17272687 Free article.

6

Protein function space: viewing the limits or limited by our view?

Raes J, Harrington ED, Singh AH, Bork P. Raes J, et al. Among authors: bork p. Curr Opin Struct Biol. 2007 Jun;17(3):362-9. doi: 10.1016/j.sbi.2007.05.010. Epub 2007 Jun 15. Curr Opin Struct Biol. 2007. PMID: 17574832 Review.

7

Quantitative assessment of protein function prediction from metagenomics shotgun sequences.

Harrington ED, Singh AH, Doerks T, Letunic I, von Mering C, Jensen LJ, Raes J, Bork P. Harrington ED, et al. Among authors: bork p. Proc Natl Acad Sci U S A. 2007 Aug 28;104(35):13913-8. doi: 10.1073/pnas.0702636104. Epub 2007 Aug 23. Proc Natl Acad Sci U S A. 2007. PMID: 17717083 Free PMC article.

8

Get the most out of your metagenome: computational analysis of environmental sequence data.

Raes J, Foerstner KU, Bork P. Raes J, et al. Among authors: bork p. Curr Opin Microbiol. 2007 Oct;10(5):490-8. doi: 10.1016/j.mib.2007.09.001. Epub 2007 Oct 23. Curr Opin Microbiol. 2007. PMID: 17936679 Review.

9

Predicting biological networks from genomic data.

Harrington ED, Jensen LJ, Bork P. Harrington ED, et al. Among authors: bork p. FEBS Lett. 2008 Apr 9;582(8):1251-8. doi: 10.1016/j.febslet.2008.02.033. Epub 2008 Feb 21. FEBS Lett. 2008. PMID: 18294967 Free article. Review.

10

Molecular eco-systems biology: towards an understanding of community function.

Raes J, Bork P. Raes J, et al. Among authors: bork p. Nat Rev Microbiol. 2008 Sep;6(9):693-9. doi: 10.1038/nrmicro1935. Nat Rev Microbiol. 2008. PMID: 18587409 Review.

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