Wang D - Search Results

1

Comparison of different normalization assumptions for analyses of DNA methylation data from the cancer genome.

Wang D, Zhang Y, Huang Y, Li P, Wang M, Wu R, Cheng L, Zhang W, Zhang Y, Li B, Wang C, Guo Z. Wang D, et al. Among authors: wang m, wang c. Gene. 2012 Sep 10;506(1):36-42. doi: 10.1016/j.gene.2012.06.075. Epub 2012 Jul 4. Gene. 2012. PMID: 22771920

2

Effects of replacing the unreliable cDNA microarray measurements on the disease classification based on gene expression profiles and functional modules.

Wang D, Lv Y, Guo Z, Li X, Li Y, Zhu J, Yang D, Xu J, Wang C, Rao S, Yang B. Wang D, et al. Among authors: wang c. Bioinformatics. 2006 Dec 1;22(23):2883-9. doi: 10.1093/bioinformatics/btl339. Epub 2006 Jun 29. Bioinformatics. 2006. PMID: 16809389

3

GO-2D: identifying 2-dimensional cellular-localized functional modules in Gene Ontology.

Zhu J, Wang J, Guo Z, Zhang M, Yang D, Li Y, Wang D, Xiao G. Zhu J, et al. Among authors: wang j, wang d. BMC Genomics. 2007 Jan 24;8:30. doi: 10.1186/1471-2164-8-30. BMC Genomics. 2007. PMID: 17250772 Free PMC article.

4

Globally predicting protein functions based on co-expressed protein-protein interaction networks and ontology taxonomy similarities.

Zhu M, Gao L, Guo Z, Li Y, Wang D, Wang J, Wang C. Zhu M, et al. Among authors: wang j, wang d, wang c. Gene. 2007 Apr 15;391(1-2):113-9. doi: 10.1016/j.gene.2006.12.008. Epub 2006 Dec 22. Gene. 2007. PMID: 17289301

5

Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-network.

Guo Z, Wang L, Li Y, Gong X, Yao C, Ma W, Wang D, Li Y, Zhu J, Zhang M, Yang D, Rao S, Wang J. Guo Z, et al. Among authors: wang l, wang j, wang d. Bioinformatics. 2007 Aug 15;23(16):2121-8. doi: 10.1093/bioinformatics/btm294. Epub 2007 Jun 1. Bioinformatics. 2007. PMID: 17545181

6

Gaining confidence in biological interpretation of the microarray data: the functional consistence of the significant GO categories.

Yang D, Li Y, Xiao H, Liu Q, Zhang M, Zhu J, Ma W, Yao C, Wang J, Wang D, Guo Z, Yang B. Yang D, et al. Among authors: wang j, wang d. Bioinformatics. 2008 Jan 15;24(2):265-71. doi: 10.1093/bioinformatics/btm558. Epub 2007 Nov 15. Bioinformatics. 2008. PMID: 18006543

7

Apparently low reproducibility of true differential expression discoveries in microarray studies.

Zhang M, Yao C, Guo Z, Zou J, Zhang L, Xiao H, Wang D, Yang D, Gong X, Zhu J, Li Y, Li X. Zhang M, et al. Among authors: wang d. Bioinformatics. 2008 Sep 15;24(18):2057-63. doi: 10.1093/bioinformatics/btn365. Epub 2008 Jul 16. Bioinformatics. 2008. PMID: 18632747

8

Evaluating reproducibility of differential expression discoveries in microarray studies by considering correlated molecular changes.

Zhang M, Zhang L, Zou J, Yao C, Xiao H, Liu Q, Wang J, Wang D, Wang C, Guo Z. Zhang M, et al. Among authors: wang j, wang d, wang c. Bioinformatics. 2009 Jul 1;25(13):1662-8. doi: 10.1093/bioinformatics/btp295. Epub 2009 May 5. Bioinformatics. 2009. PMID: 19417058 Free PMC article.

9

Evaluation of cDNA microarray data by multiple clones mapping to the same transcript.

Wang D, Wang C, Zhang L, Xiao H, Shen X, Ren L, Zhao W, Hong G, Zhang Y, Zhu J, Zhang M, Yang D, Ma W, Guo Z. Wang D, et al. Among authors: wang c. OMICS. 2009 Dec;13(6):493-9. doi: 10.1089/omi.2009.0077. OMICS. 2009. PMID: 19715395

10

Functional modules with disease discrimination abilities for various cancers.

Yao C, Zhang M, Zou J, Li H, Wang D, Zhu J, Guo Z. Yao C, et al. Among authors: wang d. Sci China Life Sci. 2011 Feb;54(2):189-93. doi: 10.1007/s11427-010-4129-7. Epub 2011 Feb 14. Sci China Life Sci. 2011. PMID: 21318490

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