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Genome-wide and caste-specific DNA methylomes of the ants Camponotus floridanus and Harpegnathos saltator.
Bonasio R, Li Q, Lian J, Mutti NS, Jin L, Zhao H, Zhang P, Wen P, Xiang H, Ding Y, Jin Z, Shen SS, Wang Z, Wang W, Wang J, Berger SL, Liebig J, Zhang G, Reinberg D. Bonasio R, et al. Among authors: zhang p, zhang g. Curr Biol. 2012 Oct 9;22(19):1755-64. doi: 10.1016/j.cub.2012.07.042. Epub 2012 Aug 9. Curr Biol. 2012. PMID: 22885060 Free PMC article.
Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator.
Bonasio R, Zhang G, Ye C, Mutti NS, Fang X, Qin N, Donahue G, Yang P, Li Q, Li C, Zhang P, Huang Z, Berger SL, Reinberg D, Wang J, Liebig J. Bonasio R, et al. Among authors: zhang p, zhang g. Science. 2010 Aug 27;329(5995):1068-71. doi: 10.1126/science.1192428. Science. 2010. PMID: 20798317 Free PMC article.
Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle.
Chen S, Zhang G, Shao C, Huang Q, Liu G, Zhang P, Song W, An N, Chalopin D, Volff JN, Hong Y, Li Q, Sha Z, Zhou H, Xie M, Yu Q, Liu Y, Xiang H, Wang N, Wu K, Yang C, Zhou Q, Liao X, Yang L, Hu Q, Zhang J, Meng L, Jin L, Tian Y, Lian J, Yang J, Miao G, Liu S, Liang Z, Yan F, Li Y, Sun B, Zhang H, Zhang J, Zhu Y, Du M, Zhao Y, Schartl M, Tang Q, Wang J. Chen S, et al. Among authors: zhang p, zhang g, zhang j, zhang h. Nat Genet. 2014 Mar;46(3):253-60. doi: 10.1038/ng.2890. Epub 2014 Feb 2. Nat Genet. 2014. PMID: 24487278
Epigenetic modification and inheritance in sexual reversal of fish.
Shao C, Li Q, Chen S, Zhang P, Lian J, Hu Q, Sun B, Jin L, Liu S, Wang Z, Zhao H, Jin Z, Liang Z, Li Y, Zheng Q, Zhang Y, Wang J, Zhang G. Shao C, et al. Among authors: zhang p, zhang g, zhang y. Genome Res. 2014 Apr;24(4):604-15. doi: 10.1101/gr.162172.113. Epub 2014 Feb 2. Genome Res. 2014. PMID: 24487721 Free PMC article.
Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior.
Li Q, Wang Z, Lian J, Schiøtt M, Jin L, Zhang P, Zhang Y, Nygaard S, Peng Z, Zhou Y, Deng Y, Zhang W, Boomsma JJ, Zhang G. Li Q, et al. Among authors: zhang p, zhang w, zhang g, zhang y. Nat Commun. 2014 Sep 30;5:4943. doi: 10.1038/ncomms5943. Nat Commun. 2014. PMID: 25266559 Free PMC article.
Comparative genomics reveals insights into avian genome evolution and adaptation.
Zhang G, Li C, Li Q, Li B, Larkin DM, Lee C, Storz JF, Antunes A, Greenwold MJ, Meredith RW, Ödeen A, Cui J, Zhou Q, Xu L, Pan H, Wang Z, Jin L, Zhang P, Hu H, Yang W, Hu J, Xiao J, Yang Z, Liu Y, Xie Q, Yu H, Lian J, Wen P, Zhang F, Li H, Zeng Y, Xiong Z, Liu S, Zhou L, Huang Z, An N, Wang J, Zheng Q, Xiong Y, Wang G, Wang B, Wang J, Fan Y, da Fonseca RR, Alfaro-Núñez A, Schubert M, Orlando L, Mourier T, Howard JT, Ganapathy G, Pfenning A, Whitney O, Rivas MV, Hara E, Smith J, Farré M, Narayan J, Slavov G, Romanov MN, Borges R, Machado JP, Khan I, Springer MS, Gatesy J, Hoffmann FG, Opazo JC, Håstad O, Sawyer RH, Kim H, Kim KW, Kim HJ, Cho S, Li N, Huang Y, Bruford MW, Zhan X, Dixon A, Bertelsen MF, Derryberry E, Warren W, Wilson RK, Li S, Ray DA, Green RE, O'Brien SJ, Griffin D, Johnson WE, Haussler D, Ryder OA, Willerslev E, Graves GR, Alström P, Fjeldså J, Mindell DP, Edwards SV, Braun EL, Rahbek C, Burt DW, Houde P, Zhang Y, Yang H, Wang J; Avian Genome Consortium; Jarvis ED, Gilbert MT, Wang J. Zhang G, et al. Among authors: zhang p, zhang f, zhang y. Science. 2014 Dec 12;346(6215):1311-20. doi: 10.1126/science.1251385. Epub 2014 Dec 11. Science. 2014. PMID: 25504712 Free PMC article.
Temporal genomic evolution of bird sex chromosomes.
Wang Z, Zhang J, Yang W, An N, Zhang P, Zhang G, Zhou Q. Wang Z, et al. Among authors: zhang p, zhang g, zhang j. BMC Evol Biol. 2014 Dec 12;14:250. doi: 10.1186/s12862-014-0250-8. BMC Evol Biol. 2014. PMID: 25527260 Free PMC article.
Phylogenomic analyses data of the avian phylogenomics project.
Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, Li C, Ho SY, Faircloth BC, Nabholz B, Howard JT, Suh A, Weber CC, da Fonseca RR, Alfaro-Núñez A, Narula N, Liu L, Burt D, Ellegren H, Edwards SV, Stamatakis A, Mindell DP, Cracraft J, Braun EL, Warnow T, Jun W, Gilbert MT, Zhang G; Avian Phylogenomics Consortium. Jarvis ED, et al. Among authors: zhang g. Gigascience. 2015 Feb 12;4:4. doi: 10.1186/s13742-014-0038-1. eCollection 2015. Gigascience. 2015. PMID: 25741440 Free PMC article.
High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps.
Georges A, Li Q, Lian J, O'Meally D, Deakin J, Wang Z, Zhang P, Fujita M, Patel HR, Holleley CE, Zhou Y, Zhang X, Matsubara K, Waters P, Graves JA, Sarre SD, Zhang G. Georges A, et al. Among authors: zhang p, zhang g, zhang x. Gigascience. 2015 Sep 28;4:45. doi: 10.1186/s13742-015-0085-2. eCollection 2015. Gigascience. 2015. PMID: 26421146 Free PMC article.
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