Papenfort K - Search Results

1

An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs.

Chao Y, Papenfort K, Reinhardt R, Sharma CM, Vogel J. Chao Y, et al. Among authors: papenfort k. EMBO J. 2012 Oct 17;31(20):4005-19. doi: 10.1038/emboj.2012.229. Epub 2012 Aug 24. EMBO J. 2012. PMID: 22922465 Free PMC article.

2

Small non-coding RNAs and the bacterial outer membrane.

Vogel J, Papenfort K. Vogel J, et al. Among authors: papenfort k. Curr Opin Microbiol. 2006 Dec;9(6):605-11. doi: 10.1016/j.mib.2006.10.006. Epub 2006 Oct 20. Curr Opin Microbiol. 2006. PMID: 17055775 Review.

3

SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay.

Papenfort K, Pfeiffer V, Mika F, Lucchini S, Hinton JC, Vogel J. Papenfort K, et al. Mol Microbiol. 2006 Dec;62(6):1674-88. doi: 10.1111/j.1365-2958.2006.05524.x. Mol Microbiol. 2006. PMID: 17427289 Free PMC article.

4

A conserved small RNA promotes discoordinate expression of the glmUS operon mRNA to activate GlmS synthesis.

Urban JH, Papenfort K, Thomsen J, Schmitz RA, Vogel J. Urban JH, et al. Among authors: papenfort k. J Mol Biol. 2007 Oct 26;373(3):521-8. doi: 10.1016/j.jmb.2007.07.035. Epub 2007 Aug 2. J Mol Biol. 2007. PMID: 17854828

5

Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis.

Papenfort K, Pfeiffer V, Lucchini S, Sonawane A, Hinton JC, Vogel J. Papenfort K, et al. Mol Microbiol. 2008 May;68(4):890-906. doi: 10.1111/j.1365-2958.2008.06189.x. Epub 2008 Apr 8. Mol Microbiol. 2008. PMID: 18399940 Free article.

6

Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq.

Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT, Hinton JC, Vogel J. Sittka A, et al. Among authors: papenfort k. PLoS Genet. 2008 Aug 22;4(8):e1000163. doi: 10.1371/journal.pgen.1000163. PLoS Genet. 2008. PMID: 18725932 Free PMC article.

7

Acid stress activation of the sigma(E) stress response in Salmonella enterica serovar Typhimurium.

Muller C, Bang IS, Velayudhan J, Karlinsey J, Papenfort K, Vogel J, Fang FC. Muller C, et al. Among authors: papenfort k. Mol Microbiol. 2009 Mar;71(5):1228-38. doi: 10.1111/j.1365-2958.2009.06597.x. Epub 2009 Jan 23. Mol Microbiol. 2009. PMID: 19170886 Free PMC article.

8

Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level.

Papenfort K, Vogel J. Papenfort K, et al. Res Microbiol. 2009 May;160(4):278-87. doi: 10.1016/j.resmic.2009.03.004. Epub 2009 Apr 12. Res Microbiol. 2009. PMID: 19366629 Review.

9

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation.

Pfeiffer V, Papenfort K, Lucchini S, Hinton JC, Vogel J. Pfeiffer V, et al. Among authors: papenfort k. Nat Struct Mol Biol. 2009 Aug;16(8):840-6. doi: 10.1038/nsmb.1631. Epub 2009 Jul 20. Nat Struct Mol Biol. 2009. PMID: 19620966

10

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA.

Papenfort K, Said N, Welsink T, Lucchini S, Hinton JCD, Vogel J. Papenfort K, et al. Mol Microbiol. 2009 Oct;74(1):139-158. doi: 10.1111/j.1365-2958.2009.06857.x. Epub 2009 Sep 2. Mol Microbiol. 2009. PMID: 19732340 Free article.

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