Strino F - Search Results

1

Integrated analysis of tumor samples sheds light on tumor heterogeneity.

Parisi F, Micsinai M, Strino F, Ariyan S, Narayan D, Bacchiocchi A, Cheng E, Xu F, Li P, Kluger H, Halaban R, Kluger Y. Parisi F, et al. Among authors: strino f. Yale J Biol Med. 2012 Sep;85(3):347-61. Epub 2012 Sep 25. Yale J Biol Med. 2012. PMID: 23012583 Free PMC article.

2

VDA, a method of choosing a better algorithm with fewer validations.

Strino F, Parisi F, Kluger Y. Strino F, et al. PLoS One. 2011;6(10):e26074. doi: 10.1371/journal.pone.0026074. Epub 2011 Oct 12. PLoS One. 2011. PMID: 22046256 Free PMC article.

3

Picking ChIP-seq peak detectors for analyzing chromatin modification experiments.

Micsinai M, Parisi F, Strino F, Asp P, Dynlacht BD, Kluger Y. Micsinai M, et al. Among authors: strino f. Nucleic Acids Res. 2012 May;40(9):e70. doi: 10.1093/nar/gks048. Epub 2012 Feb 3. Nucleic Acids Res. 2012. PMID: 22307239 Free PMC article.

4

PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes.

Gao Z, Zhang J, Bonasio R, Strino F, Sawai A, Parisi F, Kluger Y, Reinberg D. Gao Z, et al. Among authors: strino f. Mol Cell. 2012 Feb 10;45(3):344-56. doi: 10.1016/j.molcel.2012.01.002. Mol Cell. 2012. PMID: 22325352 Free PMC article.

5

IL-7 functionally segregates the pro-B cell stage by regulating transcription of recombination mediators across cell cycle.

Johnson K, Chaumeil J, Micsinai M, Wang JM, Ramsey LB, Baracho GV, Rickert RC, Strino F, Kluger Y, Farrar MA, Skok JA. Johnson K, et al. Among authors: strino f. J Immunol. 2012 Jun 15;188(12):6084-92. doi: 10.4049/jimmunol.1200368. Epub 2012 May 11. J Immunol. 2012. PMID: 22581861 Free PMC article.

6

Close proximity to Igh is a contributing factor to AID-mediated translocations.

Rocha PP, Micsinai M, Kim JR, Hewitt SL, Souza PP, Trimarchi T, Strino F, Parisi F, Kluger Y, Skok JA. Rocha PP, et al. Among authors: strino f. Mol Cell. 2012 Sep 28;47(6):873-85. doi: 10.1016/j.molcel.2012.06.036. Epub 2012 Aug 2. Mol Cell. 2012. PMID: 22864115 Free PMC article.

7

Arpeggio: harmonic compression of ChIP-seq data reveals protein-chromatin interaction signatures.

Stanton KP, Parisi F, Strino F, Rabin N, Asp P, Kluger Y. Stanton KP, et al. Among authors: strino f. Nucleic Acids Res. 2013 Sep;41(16):e161. doi: 10.1093/nar/gkt627. Epub 2013 Jul 19. Nucleic Acids Res. 2013. PMID: 23873955 Free PMC article.

8

TrAp: a tree approach for fingerprinting subclonal tumor composition.

Strino F, Parisi F, Micsinai M, Kluger Y. Strino F, et al. Nucleic Acids Res. 2013 Sep;41(17):e165. doi: 10.1093/nar/gkt641. Epub 2013 Jul 27. Nucleic Acids Res. 2013. PMID: 23892400 Free PMC article.

9

Ranking and combining multiple predictors without labeled data.

Parisi F, Strino F, Nadler B, Kluger Y. Parisi F, et al. Among authors: strino f. Proc Natl Acad Sci U S A. 2014 Jan 28;111(4):1253-8. doi: 10.1073/pnas.1219097111. Epub 2014 Jan 13. Proc Natl Acad Sci U S A. 2014. PMID: 24474744 Free PMC article.

10

FIREWACh: high-throughput functional detection of transcriptional regulatory modules in mammalian cells.

Murtha M, Tokcaer-Keskin Z, Tang Z, Strino F, Chen X, Wang Y, Xi X, Basilico C, Brown S, Bonneau R, Kluger Y, Dailey L. Murtha M, et al. Among authors: strino f. Nat Methods. 2014 May;11(5):559-65. doi: 10.1038/nmeth.2885. Epub 2014 Mar 23. Nat Methods. 2014. PMID: 24658142 Free PMC article.

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