Glass K - Search Results

1

Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis.

Xu J, Shao Z, Glass K, Bauer DE, Pinello L, Van Handel B, Hou S, Stamatoyannopoulos JA, Mikkola HK, Yuan GC, Orkin SH. Xu J, et al. Among authors: glass k. Dev Cell. 2012 Oct 16;23(4):796-811. doi: 10.1016/j.devcel.2012.09.003. Epub 2012 Oct 4. Dev Cell. 2012. PMID: 23041383 Free PMC article.

2

ETV1 directs androgen metabolism and confers aggressive prostate cancer in targeted mice and patients.

Baena E, Shao Z, Linn DE, Glass K, Hamblen MJ, Fujiwara Y, Kim J, Nguyen M, Zhang X, Godinho FJ, Bronson RT, Mucci LA, Loda M, Yuan GC, Orkin SH, Li Z. Baena E, et al. Among authors: glass k. Genes Dev. 2013 Mar 15;27(6):683-98. doi: 10.1101/gad.211011.112. Genes Dev. 2013. PMID: 23512661 Free PMC article.

3

Passing messages between biological networks to refine predicted interactions.

Glass K, Huttenhower C, Quackenbush J, Yuan GC. Glass K, et al. PLoS One. 2013 May 31;8(5):e64832. doi: 10.1371/journal.pone.0064832. Print 2013. PLoS One. 2013. PMID: 23741402 Free PMC article.

4

Sexually-dimorphic targeting of functionally-related genes in COPD.

Glass K, Quackenbush J, Silverman EK, Celli B, Rennard SI, Yuan GC, DeMeo DL. Glass K, et al. BMC Syst Biol. 2014 Nov 28;8:118. doi: 10.1186/s12918-014-0118-y. BMC Syst Biol. 2014. PMID: 25431000 Free PMC article.

5

Developmental control of polycomb subunit composition by GATA factors mediates a switch to non-canonical functions.

Xu J, Shao Z, Li D, Xie H, Kim W, Huang J, Taylor JE, Pinello L, Glass K, Jaffe JD, Yuan GC, Orkin SH. Xu J, et al. Among authors: glass k. Mol Cell. 2015 Jan 22;57(2):304-316. doi: 10.1016/j.molcel.2014.12.009. Epub 2015 Jan 8. Mol Cell. 2015. PMID: 25578878 Free PMC article.

6

Haploinsufficiency of Hedgehog interacting protein causes increased emphysema induced by cigarette smoke through network rewiring.

Lao T, Glass K, Qiu W, Polverino F, Gupta K, Morrow J, Mancini JD, Vuong L, Perrella MA, Hersh CP, Owen CA, Quackenbush J, Yuan GC, Silverman EK, Zhou X. Lao T, et al. Among authors: glass k. Genome Med. 2015 Feb 14;7(1):12. doi: 10.1186/s13073-015-0137-3. eCollection 2015. Genome Med. 2015. PMID: 25763110 Free PMC article.

7

A network model for angiogenesis in ovarian cancer.

Glass K, Quackenbush J, Spentzos D, Haibe-Kains B, Yuan GC. Glass K, et al. BMC Bioinformatics. 2015 Apr 11;16:115. doi: 10.1186/s12859-015-0551-y. BMC Bioinformatics. 2015. PMID: 25888305 Free PMC article.

8

Mitochondrial iron chelation ameliorates cigarette smoke-induced bronchitis and emphysema in mice.

Cloonan SM, Glass K, Laucho-Contreras ME, Bhashyam AR, Cervo M, Pabón MA, Konrad C, Polverino F, Siempos II, Perez E, Mizumura K, Ghosh MC, Parameswaran H, Williams NC, Rooney KT, Chen ZH, Goldklang MP, Yuan GC, Moore SC, Demeo DL, Rouault TA, D'Armiento JM, Schon EA, Manfredi G, Quackenbush J, Mahmood A, Silverman EK, Owen CA, Choi AM. Cloonan SM, et al. Among authors: glass k. Nat Med. 2016 Feb;22(2):163-74. doi: 10.1038/nm.4021. Epub 2016 Jan 11. Nat Med. 2016. PMID: 26752519 Free PMC article.

9

Multi-scale chromatin state annotation using a hierarchical hidden Markov model.

Marco E, Meuleman W, Huang J, Glass K, Pinello L, Wang J, Kellis M, Yuan GC. Marco E, et al. Among authors: glass k. Nat Commun. 2017 Apr 7;8:15011. doi: 10.1038/ncomms15011. Nat Commun. 2017. PMID: 28387224 Free PMC article.

10

Understanding Tissue-Specific Gene Regulation.

Sonawane AR, Platig J, Fagny M, Chen CY, Paulson JN, Lopes-Ramos CM, DeMeo DL, Quackenbush J, Glass K, Kuijjer ML. Sonawane AR, et al. Among authors: glass k. Cell Rep. 2017 Oct 24;21(4):1077-1088. doi: 10.1016/j.celrep.2017.10.001. Cell Rep. 2017. PMID: 29069589 Free PMC article.

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