Bajic VB - Search Results

1

Dragon TIS Spotter: an Arabidopsis-derived predictor of translation initiation sites in plants.

Magana-Mora A, Ashoor H, Jankovic BR, Kamau A, Awara K, Chowdhary R, Archer JA, Bajic VB. Magana-Mora A, et al. Among authors: bajic vb. Bioinformatics. 2013 Jan 1;29(1):117-8. doi: 10.1093/bioinformatics/bts638. Epub 2012 Oct 30. Bioinformatics. 2013. PMID: 23110968 Free PMC article.

2

Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences.

Kalkatawi M, Rangkuti F, Schramm M, Jankovic BR, Kamau A, Chowdhary R, Archer JA, Bajic VB. Kalkatawi M, et al. Among authors: bajic vb. Bioinformatics. 2012 Jan 1;28(1):127-9. doi: 10.1093/bioinformatics/btr602. Epub 2011 Nov 15. Bioinformatics. 2012. PMID: 22088842 Free PMC article.

3

Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences.

Kalkatawi M, Rangkuti F, Schramm M, Jankovic BR, Kamau A, Chowdhary R, Archer JA, Bajic VB. Kalkatawi M, et al. Among authors: bajic vb. Bioinformatics. 2013 Jun 1;29(11):1484. doi: 10.1093/bioinformatics/btt161. Epub 2013 Apr 15. Bioinformatics. 2013. PMID: 23616439 No abstract available.

4

DDR: efficient computational method to predict drug-target interactions using graph mining and machine learning approaches.

Olayan RS, Ashoor H, Bajic VB. Olayan RS, et al. Among authors: bajic vb. Bioinformatics. 2018 Apr 1;34(7):1164-1173. doi: 10.1093/bioinformatics/btx731. Bioinformatics. 2018. PMID: 29186331 Free PMC article.

5

DeepGSR: an optimized deep-learning structure for the recognition of genomic signals and regions.

Kalkatawi M, Magana-Mora A, Jankovic B, Bajic VB. Kalkatawi M, et al. Among authors: bajic vb. Bioinformatics. 2019 Apr 1;35(7):1125-1132. doi: 10.1093/bioinformatics/bty752. Bioinformatics. 2019. PMID: 30184052 Free PMC article.

6

TELS: A Novel Computational Framework for Identifying Motif Signatures of Transcribed Enhancers.

Kleftogiannis D, Ashoor H, Bajic VB. Kleftogiannis D, et al. Among authors: bajic vb. Genomics Proteomics Bioinformatics. 2018 Oct;16(5):332-341. doi: 10.1016/j.gpb.2018.05.003. Epub 2018 Dec 19. Genomics Proteomics Bioinformatics. 2018. PMID: 30578915 Free PMC article.

7

Dragon Promoter Mapper (DPM): a Bayesian framework for modelling promoter structures.

Chowdhary R, Tan SL, Ali RA, Boerlage B, Wong L, Bajic VB. Chowdhary R, et al. Among authors: bajic vb. Bioinformatics. 2006 Sep 15;22(18):2310-2. doi: 10.1093/bioinformatics/btl125. Epub 2006 Apr 13. Bioinformatics. 2006. PMID: 16613910

8

Mutations and binding sites of human transcription factors.

Kamanu FK, Medvedeva YA, Schaefer U, Jankovic BR, Archer JA, Bajic VB. Kamanu FK, et al. Among authors: bajic vb. Front Genet. 2012 Jun 1;3:100. doi: 10.3389/fgene.2012.00100. eCollection 2012. Front Genet. 2012. PMID: 22670148 Free PMC article.

9

Poly(A) motif prediction using spectral latent features from human DNA sequences.

Xie B, Jankovic BR, Bajic VB, Song L, Gao X. Xie B, et al. Among authors: bajic vb. Bioinformatics. 2013 Jul 1;29(13):i316-25. doi: 10.1093/bioinformatics/btt218. Bioinformatics. 2013. PMID: 23813000 Free PMC article.

10

Simplified method for predicting a functional class of proteins in transcription factor complexes.

Piatek MJ, Schramm MC, Burra DD, Binshbreen A, Jankovic BR, Chowdhary R, Archer JA, Bajic VB. Piatek MJ, et al. Among authors: bajic vb. PLoS One. 2013 Jul 12;8(7):e68857. doi: 10.1371/journal.pone.0068857. Print 2013. PLoS One. 2013. PMID: 23874789 Free PMC article.

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