Jankovic BR - Search Results

1

Dragon TIS Spotter: an Arabidopsis-derived predictor of translation initiation sites in plants.

Magana-Mora A, Ashoor H, Jankovic BR, Kamau A, Awara K, Chowdhary R, Archer JA, Bajic VB. Magana-Mora A, et al. Among authors: jankovic br. Bioinformatics. 2013 Jan 1;29(1):117-8. doi: 10.1093/bioinformatics/bts638. Epub 2012 Oct 30. Bioinformatics. 2013. PMID: 23110968 Free PMC article.

2

Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences.

Kalkatawi M, Rangkuti F, Schramm M, Jankovic BR, Kamau A, Chowdhary R, Archer JA, Bajic VB. Kalkatawi M, et al. Among authors: jankovic br. Bioinformatics. 2012 Jan 1;28(1):127-9. doi: 10.1093/bioinformatics/btr602. Epub 2011 Nov 15. Bioinformatics. 2012. PMID: 22088842 Free PMC article.

3

Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences.

Kalkatawi M, Rangkuti F, Schramm M, Jankovic BR, Kamau A, Chowdhary R, Archer JA, Bajic VB. Kalkatawi M, et al. Among authors: jankovic br. Bioinformatics. 2013 Jun 1;29(11):1484. doi: 10.1093/bioinformatics/btt161. Epub 2013 Apr 15. Bioinformatics. 2013. PMID: 23616439 No abstract available.

4

DeepGSR: an optimized deep-learning structure for the recognition of genomic signals and regions.

Kalkatawi M, Magana-Mora A, Jankovic B, Bajic VB. Kalkatawi M, et al. Bioinformatics. 2019 Apr 1;35(7):1125-1132. doi: 10.1093/bioinformatics/bty752. Bioinformatics. 2019. PMID: 30184052 Free PMC article.

5

Mutations and binding sites of human transcription factors.

Kamanu FK, Medvedeva YA, Schaefer U, Jankovic BR, Archer JA, Bajic VB. Kamanu FK, et al. Among authors: jankovic br. Front Genet. 2012 Jun 1;3:100. doi: 10.3389/fgene.2012.00100. eCollection 2012. Front Genet. 2012. PMID: 22670148 Free PMC article.

6

Poly(A) motif prediction using spectral latent features from human DNA sequences.

Xie B, Jankovic BR, Bajic VB, Song L, Gao X. Xie B, et al. Among authors: jankovic br. Bioinformatics. 2013 Jul 1;29(13):i316-25. doi: 10.1093/bioinformatics/btt218. Bioinformatics. 2013. PMID: 23813000 Free PMC article.

7

Simplified method for predicting a functional class of proteins in transcription factor complexes.

Piatek MJ, Schramm MC, Burra DD, Binshbreen A, Jankovic BR, Chowdhary R, Archer JA, Bajic VB. Piatek MJ, et al. Among authors: jankovic br. PLoS One. 2013 Jul 12;8(7):e68857. doi: 10.1371/journal.pone.0068857. Print 2013. PLoS One. 2013. PMID: 23874789 Free PMC article.

8

A novel method for improved accuracy of transcription factor binding site prediction.

Khamis AM, Motwalli O, Oliva R, Jankovic BR, Medvedeva YA, Ashoor H, Essack M, Gao X, Bajic VB. Khamis AM, et al. Among authors: jankovic br. Nucleic Acids Res. 2018 Jul 6;46(12):e72. doi: 10.1093/nar/gky237. Nucleic Acids Res. 2018. PMID: 29617876 Free PMC article.

9

Hybrid model for efficient prediction of poly(A) signals in human genomic DNA.

Albalawi F, Chahid A, Guo X, Albaradei S, Magana-Mora A, Jankovic BR, Uludag M, Van Neste C, Essack M, Laleg-Kirati TM, Bajic VB. Albalawi F, et al. Among authors: jankovic br. Methods. 2019 Aug 15;166:31-39. doi: 10.1016/j.ymeth.2019.04.001. Epub 2019 Apr 13. Methods. 2019. PMID: 30991099 Free article.

10

Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA.

Albaradei S, Magana-Mora A, Thafar M, Uludag M, Bajic VB, Gojobori T, Essack M, Jankovic BR. Albaradei S, et al. Among authors: jankovic br. Gene. 2020 Dec;763S:100035. doi: 10.1016/j.gene.2020.100035. Epub 2020 May 13. Gene. 2020. PMID: 34493371 Free article.

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