Zhang Y - Search Results

1

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.

Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z. Liu S, et al. Among authors: zhang j, zhang h, zhang y. BMC Genomics. 2012 Nov 5;13:595. doi: 10.1186/1471-2164-13-595. BMC Genomics. 2012. PMID: 23127152 Free PMC article.

2

The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts.

Liu Z, Liu S, Yao J, Bao L, Zhang J, Li Y, Jiang C, Sun L, Wang R, Zhang Y, Zhou T, Zeng Q, Fu Q, Gao S, Li N, Koren S, Jiang Y, Zimin A, Xu P, Phillippy AM, Geng X, Song L, Sun F, Li C, Wang X, Chen A, Jin Y, Yuan Z, Yang Y, Tan S, Peatman E, Lu J, Qin Z, Dunham R, Li Z, Sonstegard T, Feng J, Danzmann RG, Schroeder S, Scheffler B, Duke MV, Ballard L, Kucuktas H, Kaltenboeck L, Liu H, Armbruster J, Xie Y, Kirby ML, Tian Y, Flanagan ME, Mu W, Waldbieser GC. Liu Z, et al. Among authors: zhang j, zhang y. Nat Commun. 2016 Jun 2;7:11757. doi: 10.1038/ncomms11757. Nat Commun. 2016. PMID: 27249958 Free PMC article.

3

RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus.

Li C, Zhang Y, Wang R, Lu J, Nandi S, Mohanty S, Terhune J, Liu Z, Peatman E. Li C, et al. Among authors: zhang y. Fish Shellfish Immunol. 2012 May;32(5):816-27. doi: 10.1016/j.fsi.2012.02.004. Epub 2012 Feb 17. Fish Shellfish Immunol. 2012. PMID: 22366064

4

RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish.

Liu S, Wang X, Sun F, Zhang J, Feng J, Liu H, Rajendran KV, Sun L, Zhang Y, Jiang Y, Peatman E, Kaltenboeck L, Kucuktas H, Liu Z. Liu S, et al. Among authors: zhang j, zhang y. Physiol Genomics. 2013 Jun 17;45(12):462-76. doi: 10.1152/physiolgenomics.00026.2013. Epub 2013 Apr 30. Physiol Genomics. 2013. PMID: 23632418

5

Comparative genomic analysis of catfish linkage group 8 reveals two homologous chromosomes in zebrafish and other teleosts with extensive inter-chromosomal rearrangements.

Zhang Y, Liu S, Lu J, Jiang Y, Gao X, Ninwichian P, Li C, Waldbieser G, Liu Z. Zhang Y, et al. BMC Genomics. 2013 Jun 10;14:387. doi: 10.1186/1471-2164-14-387. BMC Genomics. 2013. PMID: 23758806 Free PMC article.

6

Whole genome comparative analysis of channel catfish (Ictalurus punctatus) with four model fish species.

Jiang Y, Gao X, Liu S, Zhang Y, Liu H, Sun F, Bao L, Waldbieser G, Liu Z. Jiang Y, et al. Among authors: zhang y. BMC Genomics. 2013 Nov 11;14:780. doi: 10.1186/1471-2164-14-780. BMC Genomics. 2013. PMID: 24215161 Free PMC article.

7

Development of the catfish 250K SNP array for genome-wide association studies.

Liu S, Sun L, Li Y, Sun F, Jiang Y, Zhang Y, Zhang J, Feng J, Kaltenboeck L, Kucuktas H, Liu Z. Liu S, et al. Among authors: zhang j, zhang y. BMC Res Notes. 2014 Mar 10;7:135. doi: 10.1186/1756-0500-7-135. BMC Res Notes. 2014. PMID: 24618043 Free PMC article.

8

The cytochrome P450 genes of channel catfish: their involvement in disease defense responses as revealed by meta-analysis of RNA-Seq data sets.

Zhang J, Yao J, Wang R, Zhang Y, Liu S, Sun L, Jiang Y, Feng J, Liu N, Nelson D, Waldbieser G, Liu Z. Zhang J, et al. Among authors: zhang y. Biochim Biophys Acta. 2014 Sep;1840(9):2813-28. doi: 10.1016/j.bbagen.2014.04.016. Epub 2014 Apr 27. Biochim Biophys Acta. 2014. PMID: 24780645 Free PMC article.

9

Identification and analysis of genome-wide SNPs provide insight into signatures of selection and domestication in channel catfish (Ictalurus punctatus).

Sun L, Liu S, Wang R, Jiang Y, Zhang Y, Zhang J, Bao L, Kaltenboeck L, Dunham R, Waldbieser G, Liu Z. Sun L, et al. Among authors: zhang j, zhang y. PLoS One. 2014 Oct 14;9(10):e109666. doi: 10.1371/journal.pone.0109666. eCollection 2014. PLoS One. 2014. PMID: 25313648 Free PMC article.

10

A genome-wide association study in catfish reveals the presence of functional hubs of related genes within QTLs for columnaris disease resistance.

Geng X, Sha J, Liu S, Bao L, Zhang J, Wang R, Yao J, Li C, Feng J, Sun F, Sun L, Jiang C, Zhang Y, Chen A, Dunham R, Zhi D, Liu Z. Geng X, et al. Among authors: zhang j, zhang y. BMC Genomics. 2015 Mar 17;16(1):196. doi: 10.1186/s12864-015-1409-4. BMC Genomics. 2015. PMID: 25888203 Free PMC article.

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