Rinner O - Search Results

1

Cell type-specific nuclear pores: a case in point for context-dependent stoichiometry of molecular machines.

Ori A, Banterle N, Iskar M, Andrés-Pons A, Escher C, Khanh Bui H, Sparks L, Solis-Mezarino V, Rinner O, Bork P, Lemke EA, Beck M. Ori A, et al. Among authors: rinner o. Mol Syst Biol. 2013;9:648. doi: 10.1038/msb.2013.4. Mol Syst Biol. 2013. PMID: 23511206 Free PMC article.

2

The quantitative proteome of a human cell line.

Beck M, Schmidt A, Malmstroem J, Claassen M, Ori A, Szymborska A, Herzog F, Rinner O, Ellenberg J, Aebersold R. Beck M, et al. Among authors: rinner o. Mol Syst Biol. 2011 Nov 8;7:549. doi: 10.1038/msb.2011.82. Mol Syst Biol. 2011. PMID: 22068332 Free PMC article.

3

Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics.

Leitner A, Walzthoeni T, Kahraman A, Herzog F, Rinner O, Beck M, Aebersold R. Leitner A, et al. Among authors: rinner o. Mol Cell Proteomics. 2010 Aug;9(8):1634-49. doi: 10.1074/mcp.R000001-MCP201. Epub 2010 Mar 31. Mol Cell Proteomics. 2010. PMID: 20360032 Free PMC article. Review.

4

Identification of cross-linked peptides from large sequence databases.

Rinner O, Seebacher J, Walzthoeni T, Mueller LN, Beck M, Schmidt A, Mueller M, Aebersold R. Rinner O, et al. Nat Methods. 2008 Apr;5(4):315-8. doi: 10.1038/nmeth.1192. Epub 2008 Mar 9. Nat Methods. 2008. PMID: 18327264 Free PMC article.

5

Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome.

Glatter T, Schittenhelm RB, Rinner O, Roguska K, Wepf A, Jünger MA, Köhler K, Jevtov I, Choi H, Schmidt A, Nesvizhskii AI, Stocker H, Hafen E, Aebersold R, Gstaiger M. Glatter T, et al. Among authors: rinner o. Mol Syst Biol. 2011 Nov 8;7:547. doi: 10.1038/msb.2011.79. Mol Syst Biol. 2011. PMID: 22068330 Free PMC article.

6

Using iRT, a normalized retention time for more targeted measurement of peptides.

Escher C, Reiter L, MacLean B, Ossola R, Herzog F, Chilton J, MacCoss MJ, Rinner O. Escher C, et al. Among authors: rinner o. Proteomics. 2012 Apr;12(8):1111-21. doi: 10.1002/pmic.201100463. Proteomics. 2012. PMID: 22577012 Free PMC article.

7

mProphet: automated data processing and statistical validation for large-scale SRM experiments.

Reiter L, Rinner O, Picotti P, Hüttenhain R, Beck M, Brusniak MY, Hengartner MO, Aebersold R. Reiter L, et al. Among authors: rinner o. Nat Methods. 2011 May;8(5):430-5. doi: 10.1038/nmeth.1584. Epub 2011 Mar 20. Nat Methods. 2011. PMID: 21423193

8

PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells.

Bodenmiller B, Malmstrom J, Gerrits B, Campbell D, Lam H, Schmidt A, Rinner O, Mueller LN, Shannon PT, Pedrioli PG, Panse C, Lee HK, Schlapbach R, Aebersold R. Bodenmiller B, et al. Among authors: rinner o. Mol Syst Biol. 2007;3:139. doi: 10.1038/msb4100182. Epub 2007 Oct 16. Mol Syst Biol. 2007. PMID: 17940529 Free PMC article. Review.

9

Extending the limits of quantitative proteome profiling with data-independent acquisition and application to acetaminophen-treated three-dimensional liver microtissues.

Bruderer R, Bernhardt OM, Gandhi T, Miladinović SM, Cheng LY, Messner S, Ehrenberger T, Zanotelli V, Butscheid Y, Escher C, Vitek O, Rinner O, Reiter L. Bruderer R, et al. Among authors: rinner o. Mol Cell Proteomics. 2015 May;14(5):1400-10. doi: 10.1074/mcp.M114.044305. Epub 2015 Feb 27. Mol Cell Proteomics. 2015. PMID: 25724911 Free PMC article.

10

Biomarker validation in blood specimens by selected reaction monitoring mass spectrometry of N-glycosites.

Ossola R, Schiess R, Picotti P, Rinner O, Reiter L, Aebersold R. Ossola R, et al. Among authors: rinner o. Methods Mol Biol. 2011;728:179-94. doi: 10.1007/978-1-61779-068-3_11. Methods Mol Biol. 2011. PMID: 21468948

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