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Page 1
Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia.
Cancer Genome Atlas Research Network; Ley TJ, Miller C, Ding L, Raphael BJ, Mungall AJ, Robertson A, Hoadley K, Triche TJ Jr, Laird PW, Baty JD, Fulton LL, Fulton R, Heath SE, Kalicki-Veizer J, Kandoth C, Klco JM, Koboldt DC, Kanchi KL, Kulkarni S, Lamprecht TL, Larson DE, Lin L, Lu C, McLellan MD, McMichael JF, Payton J, Schmidt H, Spencer DH, Tomasson MH, Wallis JW, Wartman LD, Watson MA, Welch J, Wendl MC, Ally A, Balasundaram M, Birol I, Butterfield Y, Chiu R, Chu A, Chuah E, Chun HJ, Corbett R, Dhalla N, Guin R, He A, Hirst C, Hirst M, Holt RA, Jones S, Karsan A, Lee D, Li HI, Marra MA, Mayo M, Moore RA, Mungall K, Parker J, Pleasance E, Plettner P, Schein J, Stoll D, Swanson L, Tam A, Thiessen N, Varhol R, Wye N, Zhao Y, Gabriel S, Getz G, Sougnez C, Zou L, Leiserson MD, Vandin F, Wu HT, Applebaum F, Baylin SB, Akbani R, Broom BM, Chen K, Motter TC, Nguyen K, Weinstein JN, Zhang N, Ferguson ML, Adams C, Black A, Bowen J, Gastier-Foster J, Grossman T, Lichtenberg T, Wise L, Davidsen T, Demchok JA, Shaw KR, Sheth M, Sofia HJ, Yang L, Downing JR, Eley G. Cancer Genome Atlas Research Network, et al. Among authors: swanson l. N Engl J Med. 2013 May 30;368(22):2059-74. doi: 10.1056/NEJMoa1301689. Epub 2013 May 1. N Engl J Med. 2013. PMID: 23634996 Free PMC article.
Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies.
Swanson L, Robertson G, Mungall KL, Butterfield YS, Chiu R, Corbett RD, Docking TR, Hogge D, Jackman SD, Moore RA, Mungall AJ, Nip KM, Parker JD, Qian JQ, Raymond A, Sung S, Tam A, Thiessen N, Varhol R, Wang S, Yorukoglu D, Zhao Y, Hoodless PA, Sahinalp SC, Karsan A, Birol I. Swanson L, et al. BMC Genomics. 2013 Aug 14;14:550. doi: 10.1186/1471-2164-14-550. BMC Genomics. 2013. PMID: 23941359 Free PMC article.
Sample Tracking Using Unique Sequence Controls.
Moore RA, Zeng T, Docking TR, Bosdet I, Butterfield YS, Munro S, Li I, Swanson L, Starks ER, Tse K, Mungall AJ, Holt RA, Karsan A. Moore RA, et al. Among authors: swanson l. J Mol Diagn. 2020 Feb;22(2):141-146. doi: 10.1016/j.jmoldx.2019.10.011. Epub 2019 Dec 16. J Mol Diagn. 2020. PMID: 31837431 Free article.
A clinical transcriptome approach to patient stratification and therapy selection in acute myeloid leukemia.
Docking TR, Parker JDK, Jädersten M, Duns G, Chang L, Jiang J, Pilsworth JA, Swanson LA, Chan SK, Chiu R, Nip KM, Mar S, Mo A, Wang X, Martinez-Høyer S, Stubbins RJ, Mungall KL, Mungall AJ, Moore RA, Jones SJM, Birol İ, Marra MA, Hogge D, Karsan A. Docking TR, et al. Among authors: swanson la. Nat Commun. 2021 Apr 30;12(1):2474. doi: 10.1038/s41467-021-22625-y. Nat Commun. 2021. PMID: 33931648 Free PMC article.
Assessing Limit of Detection in Clinical Sequencing.
Starks ER, Swanson L, Docking TR, Bosdet I, Munro S, Moore RA, Karsan A. Starks ER, et al. Among authors: swanson l. J Mol Diagn. 2021 Apr;23(4):455-466. doi: 10.1016/j.jmoldx.2020.12.010. Epub 2021 Jan 22. J Mol Diagn. 2021. PMID: 33486075 Free article.
Use of Treatment-Focused Tumor Sequencing to Screen for Germline Cancer Predisposition.
Lau TTY, May CM, Sefid Dashti ZJ, Swanson L, Starks ER, Parker JDK, Moore RA, Tucker T, Bosdet I, Young SS, Santos JL, Compton K, Heidary N, Hoang L, Schrader KA, Sun S, Kwon JS, Tinker AV, Karsan A. Lau TTY, et al. Among authors: swanson l. J Mol Diagn. 2021 Sep;23(9):1145-1158. doi: 10.1016/j.jmoldx.2021.06.006. Epub 2021 Jun 29. J Mol Diagn. 2021. PMID: 34197922 Free article.
Enhancing clinical genomic accuracy with panelGC: a novel metric and tool for quantifying and monitoring GC biases in hybridization capture panel sequencing.
Cheng X, Goktas MT, Williamson LM, Krzywinski M, Mulder DT, Swanson L, Slind J, Sihvonen J, Chow CR, Carr A, Bosdet I, Tucker T, Young S, Moore R, Mungall KL, Yip S, Jones SJM. Cheng X, et al. Among authors: swanson l. Brief Bioinform. 2024 Jul 25;25(5):bbae442. doi: 10.1093/bib/bbae442. Brief Bioinform. 2024. PMID: 39256198 Free PMC article.
Non-invasive prenatal aneuploidy testing: Critical diagnostic performance parameters predict sample z-score values.
Blais J, Giroux S, Caron A, Clément V, Dionne-Laporte A, Jouan L, Gauthier J, MacLeod T, Moore R, Parker J, Swanson L, Zhao Y, Rouleau G, Karsan A, Langlois S, Rousseau F. Blais J, et al. Among authors: swanson l. Clin Biochem. 2018 Sep;59:69-77. doi: 10.1016/j.clinbiochem.2018.06.015. Epub 2018 Jun 27. Clin Biochem. 2018. PMID: 29958880 Free article.
Prospective head-to-head comparison of accuracy of two sequencing platforms for screening for fetal aneuploidy by cell-free DNA: the PEGASUS study.
Rousseau F, Langlois S, Johnson JA, Gekas J, Bujold E, Audibert F, Walker M, Giroux S, Caron A, Clément V, Blais J, MacLeod T, Moore R, Gauthier J, Jouan L, Laporte A, Diallo O, Parker J, Swanson L, Zhao Y, Labelle Y, Giguère Y, Forest JC, Little J, Karsan A, Rouleau G. Rousseau F, et al. Among authors: swanson l. Eur J Hum Genet. 2019 Nov;27(11):1701-1715. doi: 10.1038/s41431-019-0443-0. Epub 2019 Jun 23. Eur J Hum Genet. 2019. PMID: 31231136 Free PMC article.
717 results