Gottardo R - Search Results

1

iBMQ: a R/Bioconductor package for integrated Bayesian modeling of eQTL data.

Imholte GC, Scott-Boyer MP, Labbe A, Deschepper CF, Gottardo R. Imholte GC, et al. Among authors: gottardo r. Bioinformatics. 2013 Nov 1;29(21):2797-8. doi: 10.1093/bioinformatics/btt485. Epub 2013 Aug 19. Bioinformatics. 2013. PMID: 23958729 Free PMC article.

2

Statistical analysis of microarray data: a Bayesian approach.

Gottardo R, Pannucci JA, Kuske CR, Brettin T. Gottardo R, et al. Biostatistics. 2003 Oct;4(4):597-620. doi: 10.1093/biostatistics/4.4.597. Biostatistics. 2003. PMID: 14557114

3

Probabilistic segmentation and intensity estimation for microarray images.

Gottardo R, Besag J, Stephens M, Murua A. Gottardo R, et al. Biostatistics. 2006 Jan;7(1):85-99. doi: 10.1093/biostatistics/kxi042. Epub 2005 Jul 27. Biostatistics. 2006. PMID: 16049139

4

Flexible empirical Bayes models for differential gene expression.

Lo K, Gottardo R. Lo K, et al. Among authors: gottardo r. Bioinformatics. 2007 Feb 1;23(3):328-35. doi: 10.1093/bioinformatics/btl612. Epub 2006 Nov 30. Bioinformatics. 2007. PMID: 17138586

5

rMAT--an R/Bioconductor package for analyzing ChIP-chip experiments.

Droit A, Cheung C, Gottardo R. Droit A, et al. Among authors: gottardo r. Bioinformatics. 2010 Mar 1;26(5):678-9. doi: 10.1093/bioinformatics/btq023. Epub 2010 Jan 19. Bioinformatics. 2010. PMID: 20089513

6

An integrated hierarchical Bayesian model for multivariate eQTL mapping.

Scott-Boyer MP, Imholte GC, Tayeb A, Labbe A, Deschepper CF, Gottardo R. Scott-Boyer MP, et al. Among authors: gottardo r. Stat Appl Genet Mol Biol. 2012 Jul 12;11(4):10.1515/1544-6115.1760 /j/sagmb.2012.11.issue-4/1544-6115.1760/1544-6115.1760.xml. doi: 10.1515/1544-6115.1760. Stat Appl Genet Mol Biol. 2012. PMID: 22850063 Free PMC article.

7

Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments.

McDavid A, Finak G, Chattopadyay PK, Dominguez M, Lamoreaux L, Ma SS, Roederer M, Gottardo R. McDavid A, et al. Among authors: gottardo r. Bioinformatics. 2013 Feb 15;29(4):461-7. doi: 10.1093/bioinformatics/bts714. Epub 2012 Dec 24. Bioinformatics. 2013. PMID: 23267174 Free PMC article.

8

A computational framework for the analysis of peptide microarray antibody binding data with application to HIV vaccine profiling.

Imholte GC, Sauteraud R, Korber B, Bailer RT, Turk ET, Shen X, Tomaras GD, Mascola JR, Koup RA, Montefiori DC, Gottardo R. Imholte GC, et al. Among authors: gottardo r. J Immunol Methods. 2013 Sep 30;395(1-2):1-13. doi: 10.1016/j.jim.2013.06.001. Epub 2013 Jun 13. J Immunol Methods. 2013. PMID: 23770318 Free PMC article.

9

PING 2.0: an R/Bioconductor package for nucleosome positioning using next-generation sequencing data.

Woo S, Zhang X, Sauteraud R, Robert F, Gottardo R. Woo S, et al. Among authors: gottardo r. Bioinformatics. 2013 Aug 15;29(16):2049-50. doi: 10.1093/bioinformatics/btt348. Epub 2013 Jun 20. Bioinformatics. 2013. PMID: 23786769 Free PMC article.

10

Mixture models for single-cell assays with applications to vaccine studies.

Finak G, McDavid A, Chattopadhyay P, Dominguez M, De Rosa S, Roederer M, Gottardo R. Finak G, et al. Among authors: gottardo r. Biostatistics. 2014 Jan;15(1):87-101. doi: 10.1093/biostatistics/kxt024. Epub 2013 Jul 24. Biostatistics. 2014. PMID: 23887981 Free PMC article.

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