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Contribution of mutant HSC clones to immature and mature cells in MDS and CMML, and variations with AZA therapy.
Schnegg-Kaufmann AS, Thoms JAI, Bhuyan GS, Hampton HR, Vaughan L, Rutherford K, Kakadia PM, Lee HM, Johansson EMV, Failes TW, Arndt GM, Koval J, Lindeman R, Warburton P, Rodriguez-Meira A, Mead AJ, Unnikrishnan A, Davidson S, Polizzotto MN, Hertzberg M, Papaemmanuil E, Bohlander SK, Faridani OR, Jolly CJ, Zanini F, Pimanda JE. Schnegg-Kaufmann AS, et al. Blood. 2023 Mar 16;141(11):1316-1321. doi: 10.1182/blood.2022018602. Blood. 2023. PMID: 36493342 Free PMC article.
Full-length RNA-seq from single cells using Smart-seq2.
Picelli S, Faridani OR, Björklund AK, Winberg G, Sagasser S, Sandberg R. Picelli S, et al. Among authors: faridani or. Nat Protoc. 2014 Jan;9(1):171-81. doi: 10.1038/nprot.2014.006. Epub 2014 Jan 2. Nat Protoc. 2014. PMID: 24385147
Putting cells in their place.
Faridani OR, Sandberg R. Faridani OR, et al. Nat Biotechnol. 2015 May;33(5):490-1. doi: 10.1038/nbt.3219. Nat Biotechnol. 2015. PMID: 25965757 No abstract available.
In Vivo Effects of Mesenchymal Stromal Cells in Two Patients With Severe Acute Respiratory Distress Syndrome.
Simonson OE, Mougiakakos D, Heldring N, Bassi G, Johansson HJ, Dalén M, Jitschin R, Rodin S, Corbascio M, El Andaloussi S, Wiklander OP, Nordin JZ, Skog J, Romain C, Koestler T, Hellgren-Johansson L, Schiller P, Joachimsson PO, Hägglund H, Mattsson M, Lehtiö J, Faridani OR, Sandberg R, Korsgren O, Krampera M, Weiss DJ, Grinnemo KH, Le Blanc K. Simonson OE, et al. Among authors: faridani or. Stem Cells Transl Med. 2015 Oct;4(10):1199-213. doi: 10.5966/sctm.2015-0021. Epub 2015 Aug 18. Stem Cells Transl Med. 2015. PMID: 26285659 Free PMC article.
Single-cell sequencing of the small-RNA transcriptome.
Faridani OR, Abdullayev I, Hagemann-Jensen M, Schell JP, Lanner F, Sandberg R. Faridani OR, et al. Nat Biotechnol. 2016 Dec;34(12):1264-1266. doi: 10.1038/nbt.3701. Epub 2016 Oct 31. Nat Biotechnol. 2016. PMID: 27798564
Small-seq for single-cell small-RNA sequencing.
Hagemann-Jensen M, Abdullayev I, Sandberg R, Faridani OR. Hagemann-Jensen M, et al. Among authors: faridani or. Nat Protoc. 2018 Oct;13(10):2407-2424. doi: 10.1038/s41596-018-0049-y. Nat Protoc. 2018. PMID: 30250291
Genomic encoding of transcriptional burst kinetics.
Larsson AJM, Johnsson P, Hagemann-Jensen M, Hartmanis L, Faridani OR, Reinius B, Segerstolpe Å, Rivera CM, Ren B, Sandberg R. Larsson AJM, et al. Among authors: faridani or. Nature. 2019 Jan;565(7738):251-254. doi: 10.1038/s41586-018-0836-1. Epub 2019 Jan 2. Nature. 2019. PMID: 30602787 Free PMC article.
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