Ryan CJ - Search Results

1

Chemical genetics of rapamycin-insensitive TORC2 in S. cerevisiae.

Kliegman JI, Fiedler D, Ryan CJ, Xu YF, Su XY, Thomas D, Caccese MC, Cheng A, Shales M, Rabinowitz JD, Krogan NJ, Shokat KM. Kliegman JI, et al. Among authors: ryan cj. Cell Rep. 2013 Dec 26;5(6):1725-36. doi: 10.1016/j.celrep.2013.11.040. Epub 2013 Dec 19. Cell Rep. 2013. PMID: 24360963 Free PMC article.

2

Improved functional overview of protein complexes using inferred epistatic relationships.

Ryan C, Greene D, Guénolé A, van Attikum H, Krogan NJ, Cunningham P, Cagney G. Ryan C, et al. BMC Syst Biol. 2011 May 23;5:80. doi: 10.1186/1752-0509-5-80. BMC Syst Biol. 2011. PMID: 21605386 Free PMC article.

3

Key functional regions in the histone variant H2A.Z C-terminal docking domain.

Wang AY, Aristizabal MJ, Ryan C, Krogan NJ, Kobor MS. Wang AY, et al. Mol Cell Biol. 2011 Sep;31(18):3871-84. doi: 10.1128/MCB.05182-11. Epub 2011 Jul 26. Mol Cell Biol. 2011. PMID: 21791612 Free PMC article.

4

Imputing and predicting quantitative genetic interactions in epistatic MAPs.

Ryan C, Cagney G, Krogan N, Cunningham P, Greene D. Ryan C, et al. Methods Mol Biol. 2011;781:353-61. doi: 10.1007/978-1-61779-276-2_17. Methods Mol Biol. 2011. PMID: 21877290 Free PMC article.

5

Hierarchical modularity and the evolution of genetic interactomes across species.

Ryan CJ, Roguev A, Patrick K, Xu J, Jahari H, Tong Z, Beltrao P, Shales M, Qu H, Collins SR, Kliegman JI, Jiang L, Kuo D, Tosti E, Kim HS, Edelmann W, Keogh MC, Greene D, Tang C, Cunningham P, Shokat KM, Cagney G, Svensson JP, Guthrie C, Espenshade PJ, Ideker T, Krogan NJ. Ryan CJ, et al. Mol Cell. 2012 Jun 8;46(5):691-704. doi: 10.1016/j.molcel.2012.05.028. Mol Cell. 2012. PMID: 22681890 Free PMC article.

6

Comparative interaction networks: bridging genotype to phenotype.

Beltrao P, Ryan C, Krogan NJ. Beltrao P, et al. Adv Exp Med Biol. 2012;751:139-56. doi: 10.1007/978-1-4614-3567-9_7. Adv Exp Med Biol. 2012. PMID: 22821457 Free PMC article. Review.

7

The yeast SR-like protein Npl3 links chromatin modification to mRNA processing.

Moehle EA, Ryan CJ, Krogan NJ, Kress TL, Guthrie C. Moehle EA, et al. Among authors: ryan cj. PLoS Genet. 2012;8(11):e1003101. doi: 10.1371/journal.pgen.1003101. Epub 2012 Nov 29. PLoS Genet. 2012. PMID: 23209445 Free PMC article.

8

All or nothing: protein complexes flip essentiality between distantly related eukaryotes.

Ryan CJ, Krogan NJ, Cunningham P, Cagney G. Ryan CJ, et al. Genome Biol Evol. 2013;5(6):1049-59. doi: 10.1093/gbe/evt074. Genome Biol Evol. 2013. PMID: 23661563 Free PMC article.

9

Systematic triple-mutant analysis uncovers functional connectivity between pathways involved in chromosome regulation.

Haber JE, Braberg H, Wu Q, Alexander R, Haase J, Ryan C, Lipkin-Moore Z, Franks-Skiba KE, Johnson T, Shales M, Lenstra TL, Holstege FC, Johnson JR, Bloom K, Krogan NJ. Haber JE, et al. Cell Rep. 2013 Jun 27;3(6):2168-78. doi: 10.1016/j.celrep.2013.05.007. Epub 2013 Jun 6. Cell Rep. 2013. PMID: 23746449 Free PMC article.

10

High-resolution network biology: connecting sequence with function.

Ryan CJ, Cimermančič P, Szpiech ZA, Sali A, Hernandez RD, Krogan NJ. Ryan CJ, et al. Nat Rev Genet. 2013 Dec;14(12):865-79. doi: 10.1038/nrg3574. Epub 2013 Nov 7. Nat Rev Genet. 2013. PMID: 24197012 Free PMC article. Review.

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