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Page 1
Highly connected 3D chromatin networks established by an oncogenic fusion protein shape tumor cell identity.
Sanalkumar R, Dong R, Lee L, Xing YH, Iyer S, Letovanec I, La Rosa S, Finzi G, Musolino E, Papait R, Chebib I, Nielsen GP, Renella R, Cote GM, Choy E, Aryee M, Stegmaier K, Stamenkovic I, Rivera MN, Riggi N. Sanalkumar R, et al. Sci Adv. 2023 Mar 31;9(13):eabo3789. doi: 10.1126/sciadv.abo3789. Epub 2023 Mar 31. Sci Adv. 2023. PMID: 37000878 Free PMC article.
Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts.
Doi A, Park IH, Wen B, Murakami P, Aryee MJ, Irizarry R, Herb B, Ladd-Acosta C, Rho J, Loewer S, Miller J, Schlaeger T, Daley GQ, Feinberg AP. Doi A, et al. Among authors: aryee mj. Nat Genet. 2009 Dec;41(12):1350-3. doi: 10.1038/ng.471. Epub 2009 Nov 1. Nat Genet. 2009. PMID: 19881528 Free PMC article.
Comprehensive high-throughput arrays for relative methylation (CHARM).
Ladd-Acosta C, Aryee MJ, Ordway JM, Feinberg AP. Ladd-Acosta C, et al. Among authors: aryee mj. Curr Protoc Hum Genet. 2010 Apr;Chapter 20:Unit 20.1.1-19. doi: 10.1002/0471142905.hg2001s65. Curr Protoc Hum Genet. 2010. PMID: 20373514 Free PMC article.
Epigenetic memory in induced pluripotent stem cells.
Kim K, Doi A, Wen B, Ng K, Zhao R, Cahan P, Kim J, Aryee MJ, Ji H, Ehrlich LI, Yabuuchi A, Takeuchi A, Cunniff KC, Hongguang H, McKinney-Freeman S, Naveiras O, Yoon TJ, Irizarry RA, Jung N, Seita J, Hanna J, Murakami P, Jaenisch R, Weissleder R, Orkin SH, Weissman IL, Feinberg AP, Daley GQ. Kim K, et al. Among authors: aryee mj. Nature. 2010 Sep 16;467(7313):285-90. doi: 10.1038/nature09342. Nature. 2010. PMID: 20644535 Free PMC article.
Comprehensive methylome map of lineage commitment from haematopoietic progenitors.
Ji H, Ehrlich LI, Seita J, Murakami P, Doi A, Lindau P, Lee H, Aryee MJ, Irizarry RA, Kim K, Rossi DJ, Inlay MA, Serwold T, Karsunky H, Ho L, Daley GQ, Weissman IL, Feinberg AP. Ji H, et al. Among authors: aryee mj. Nature. 2010 Sep 16;467(7313):338-42. doi: 10.1038/nature09367. Epub 2010 Aug 15. Nature. 2010. PMID: 20720541 Free PMC article.
Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences.
Yegnasubramanian S, Wu Z, Haffner MC, Esopi D, Aryee MJ, Badrinath R, He TL, Morgan JD, Carvalho B, Zheng Q, De Marzo AM, Irizarry RA, Nelson WG. Yegnasubramanian S, et al. Among authors: aryee mj. BMC Genomics. 2011 Jun 13;12:313. doi: 10.1186/1471-2164-12-313. BMC Genomics. 2011. PMID: 21669002 Free PMC article.
109 results