Lawrence M - Search Results

1

VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants.

Obenchain V, Lawrence M, Carey V, Gogarten S, Shannon P, Morgan M. Obenchain V, et al. Among authors: lawrence m. Bioinformatics. 2014 Jul 15;30(14):2076-8. doi: 10.1093/bioinformatics/btu168. Epub 2014 Mar 28. Bioinformatics. 2014. PMID: 24681907 Free PMC article.

2

rtracklayer: an R package for interfacing with genome browsers.

Lawrence M, Gentleman R, Carey V. Lawrence M, et al. Bioinformatics. 2009 Jul 15;25(14):1841-2. doi: 10.1093/bioinformatics/btp328. Epub 2009 May 25. Bioinformatics. 2009. PMID: 19468054 Free PMC article.

3

ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data.

Morgan M, Anders S, Lawrence M, Aboyoun P, Pagès H, Gentleman R. Morgan M, et al. Among authors: lawrence m. Bioinformatics. 2009 Oct 1;25(19):2607-8. doi: 10.1093/bioinformatics/btp450. Epub 2009 Aug 3. Bioinformatics. 2009. PMID: 19654119 Free PMC article.

4

Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.

Cao Y, Yao Z, Sarkar D, Lawrence M, Sanchez GJ, Parker MH, MacQuarrie KL, Davison J, Morgan MT, Ruzzo WL, Gentleman RC, Tapscott SJ. Cao Y, et al. Among authors: lawrence m. Dev Cell. 2010 Apr 20;18(4):662-74. doi: 10.1016/j.devcel.2010.02.014. Dev Cell. 2010. PMID: 20412780 Free PMC article.

5

Software for computing and annotating genomic ranges.

Lawrence M, Huber W, Pagès H, Aboyoun P, Carlson M, Gentleman R, Morgan MT, Carey VJ. Lawrence M, et al. PLoS Comput Biol. 2013;9(8):e1003118. doi: 10.1371/journal.pcbi.1003118. Epub 2013 Aug 8. PLoS Comput Biol. 2013. PMID: 23950696 Free PMC article.

6

ReportingTools: an automated result processing and presentation toolkit for high-throughput genomic analyses.

Huntley MA, Larson JL, Chaivorapol C, Becker G, Lawrence M, Hackney JA, Kaminker JS. Huntley MA, et al. Among authors: lawrence m. Bioinformatics. 2013 Dec 15;29(24):3220-1. doi: 10.1093/bioinformatics/btt551. Epub 2013 Sep 29. Bioinformatics. 2013. PMID: 24078713 Free PMC article.

7

Orchestrating high-throughput genomic analysis with Bioconductor.

Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M. Huber W, et al. Among authors: lawrence m. Nat Methods. 2015 Feb;12(2):115-21. doi: 10.1038/nmeth.3252. Nat Methods. 2015. PMID: 25633503 Free PMC article. Review.

8

SomaticSignatures: inferring mutational signatures from single-nucleotide variants.

Gehring JS, Fischer B, Lawrence M, Huber W. Gehring JS, et al. Among authors: lawrence m. Bioinformatics. 2015 Nov 15;31(22):3673-5. doi: 10.1093/bioinformatics/btv408. Epub 2015 Jul 10. Bioinformatics. 2015. PMID: 26163694 Free PMC article.

9

Scalable Genomics with R and Bioconductor.

Lawrence M, Morgan M. Lawrence M, et al. Stat Sci. 2014 May;29(2):214-226. doi: 10.1214/14-STS476. Epub 2014 Aug 18. Stat Sci. 2014. PMID: 28018047 Free PMC article.

10

SeqArray-a storage-efficient high-performance data format for WGS variant calls.

Zheng X, Gogarten SM, Lawrence M, Stilp A, Conomos MP, Weir BS, Laurie C, Levine D. Zheng X, et al. Among authors: lawrence m. Bioinformatics. 2017 Aug 1;33(15):2251-2257. doi: 10.1093/bioinformatics/btx145. Bioinformatics. 2017. PMID: 28334390 Free PMC article.

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