Yang JM - Search Results

1

DNA mimic proteins: functions, structures, and bioinformatic analysis.

Wang HC, Ho CH, Hsu KC, Yang JM, Wang AH. Wang HC, et al. Among authors: yang jm. Biochemistry. 2014 May 13;53(18):2865-74. doi: 10.1021/bi5002689. Epub 2014 Apr 30. Biochemistry. 2014. PMID: 24766129 Review.

2

The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris.

Chin KH, Lee YC, Tu ZL, Chen CH, Tseng YH, Yang JM, Ryan RP, McCarthy Y, Dow JM, Wang AH, Chou SH. Chin KH, et al. Among authors: yang jm. J Mol Biol. 2010 Feb 26;396(3):646-62. doi: 10.1016/j.jmb.2009.11.076. Epub 2009 Dec 18. J Mol Biol. 2010. PMID: 20004667

3

SiMMap: a web server for inferring site-moiety map to recognize interaction preferences between protein pockets and compound moieties.

Chen YF, Hsu KC, Lin SR, Wang WC, Huang YC, Yang JM. Chen YF, et al. Among authors: yang jm. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W424-30. doi: 10.1093/nar/gkq480. Epub 2010 Jun 2. Nucleic Acids Res. 2010. PMID: 20519201 Free PMC article.

4

7-Chloro-6-piperidin-1-yl-quinoline-5,8-dione (PT-262), a novel ROCK inhibitor blocks cytoskeleton function and cell migration.

Tsai CC, Liu HF, Hsu KC, Yang JM, Chen C, Liu KK, Hsu TS, Chao JI. Tsai CC, et al. Among authors: yang jm. Biochem Pharmacol. 2011 Apr 1;81(7):856-65. doi: 10.1016/j.bcp.2011.01.009. Epub 2011 Jan 26. Biochem Pharmacol. 2011. PMID: 21276421

5

iGEMDOCK: a graphical environment of enhancing GEMDOCK using pharmacological interactions and post-screening analysis.

Hsu KC, Chen YF, Lin SR, Yang JM. Hsu KC, et al. Among authors: yang jm. BMC Bioinformatics. 2011 Feb 15;12 Suppl 1(Suppl 1):S33. doi: 10.1186/1471-2105-12-S1-S33. BMC Bioinformatics. 2011. PMID: 21342564 Free PMC article.

6

LigSeeSVM: ligand-based virtual screening using support vector machines and data fusion.

Chen YF, Hsu KC, Lin PT, Hsu DF, Kristal BS, Yang JM. Chen YF, et al. Among authors: yang jm. Int J Comput Biol Drug Des. 2011;4(3):274-89. doi: 10.1504/IJCBDD.2011.041415. Epub 2011 Jul 21. Int J Comput Biol Drug Des. 2011. PMID: 21778560 Free PMC article.

7

Core site-moiety maps reveal inhibitors and binding mechanisms of orthologous proteins by screening compound libraries.

Hsu KC, Cheng WC, Chen YF, Wang HJ, Li LT, Wang WC, Yang JM. Hsu KC, et al. Among authors: yang jm. PLoS One. 2012;7(2):e32142. doi: 10.1371/journal.pone.0032142. Epub 2012 Feb 29. PLoS One. 2012. PMID: 22393385 Free PMC article.

8

Structures of Helicobacter pylori shikimate kinase reveal a selective inhibitor-induced-fit mechanism.

Cheng WC, Chen YF, Wang HJ, Hsu KC, Lin SC, Chen TJ, Yang JM, Wang WC. Cheng WC, et al. Among authors: yang jm. PLoS One. 2012;7(3):e33481. doi: 10.1371/journal.pone.0033481. Epub 2012 Mar 16. PLoS One. 2012. PMID: 22438938 Free PMC article.

9

Roles of amino acids in the Escherichia coli octaprenyl diphosphate synthase active site probed by structure-guided site-directed mutagenesis.

Chang KM, Chen SH, Kuo CJ, Chang CK, Guo RT, Yang JM, Liang PH. Chang KM, et al. Among authors: yang jm. Biochemistry. 2012 Apr 24;51(16):3412-9. doi: 10.1021/bi300069j. Epub 2012 Apr 10. Biochemistry. 2012. PMID: 22471615

10

GemAffinity: a scoring function for predicting binding affinity and virtual screening.

Hsu KC, Chen YF, Yang JM. Hsu KC, et al. Among authors: yang jm. Int J Data Min Bioinform. 2012;6(1):27-41. doi: 10.1504/ijdmb.2012.045535. Int J Data Min Bioinform. 2012. PMID: 22479817

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