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Page 1
Bioorthogonal cyclopropenones for investigating RNA structure.
Chen S, Sibley CD, Latifi B, Balaratnam S, Dorn RS, Lupták A, Schneekloth JS Jr, Prescher JA. Chen S, et al. Among authors: schneekloth js jr. bioRxiv [Preprint]. 2024 Oct 24:2024.10.22.619649. doi: 10.1101/2024.10.22.619649. bioRxiv. 2024. PMID: 39484557 Free PMC article. Preprint.
Machine learning-augmented molecular dynamics simulations (MD) reveal insights into the disconnect between affinity and activation of ZTP riboswitch ligands.
Fullenkamp CR, Mehdi S, Jones CP, Tenney L, Pichling P, Prestwood PR, Ferré-D'Amaré AR, Tiwary P, Schneekloth JS Jr. Fullenkamp CR, et al. Among authors: schneekloth js jr. bioRxiv [Preprint]. 2024 Sep 14:2024.09.13.612887. doi: 10.1101/2024.09.13.612887. bioRxiv. 2024. PMID: 39314358 Free PMC article. Preprint.
Structure-Informed Design of an Ultra Bright RNA-activated Fluorophore.
Schneekloth JS Jr, Yang M, Prestwood P, Passalacqua L, Balaratnam S, Fullenkamp C, Arney W, Weeks KM, Ferre-D'Amare A. Schneekloth JS Jr, et al. Res Sq [Preprint]. 2024 Aug 5:rs.3.rs-4750449. doi: 10.21203/rs.3.rs-4750449/v1. Res Sq. 2024. PMID: 39149476 Free PMC article. Preprint.
Mechanistic Analysis of Riboswitch Ligand Interactions Provides Insights into Pharmacological Control over Gene Expression.
Parmar S, Bume DD, Conelly C, Boer R, Prestwood PR, Wang Z, Labuhn H, Sinnadurai K, Feri A, Ouellet J, Homan P, Numata T, Schneekloth JS Jr. Parmar S, et al. Among authors: schneekloth js jr. bioRxiv [Preprint]. 2024 Feb 23:2024.02.23.581746. doi: 10.1101/2024.02.23.581746. bioRxiv. 2024. Update in: Nat Commun. 2024 Sep 17;15(1):8173. doi: 10.1038/s41467-024-52235-3 PMID: 38903087 Free PMC article. Updated. Preprint.
KDM3B inhibitors disrupt the oncogenic activity of PAX3-FOXO1 in fusion-positive rhabdomyosarcoma.
Kim YY, Gryder BE, Sinniah R, Peach ML, Shern JF, Abdelmaksoud A, Pomella S, Woldemichael GM, Stanton BZ, Milewski D, Barchi JJ Jr, Schneekloth JS Jr, Chari R, Kowalczyk JT, Shenoy SR, Evans JR, Song YK, Wang C, Wen X, Chou HC, Gangalapudi V, Esposito D, Jones J, Procter L, O'Neill M, Jenkins LM, Tarasova NI, Wei JS, McMahon JB, O'Keefe BR, Hawley RG, Khan J. Kim YY, et al. Among authors: schneekloth js jr. Nat Commun. 2024 Feb 24;15(1):1703. doi: 10.1038/s41467-024-45902-y. Nat Commun. 2024. PMID: 38402212 Free PMC article.
RNA as an off-target for FDA-approved drugs.
Fullenkamp CR, Schneekloth JS Jr. Fullenkamp CR, et al. Among authors: schneekloth js jr. Nat Chem. 2023 Oct;15(10):1329-1331. doi: 10.1038/s41557-023-01330-x. Nat Chem. 2023. PMID: 37697037 No abstract available.
Discovery of Small Molecules Targeting the Frameshifting Element RNA in SARS-CoV-2 Viral Genome.
Yang M, Olatunji FP, Rhodes C, Balaratnam S, Dunne-Dombrink K, Seshadri S, Liang X, Jones CP, Le Grice SFJ, Ferré-D'Amaré AR, Schneekloth JS Jr. Yang M, et al. Among authors: schneekloth js jr. ACS Med Chem Lett. 2023 May 11;14(6):757-765. doi: 10.1021/acsmedchemlett.3c00051. eCollection 2023 Jun 8. ACS Med Chem Lett. 2023. PMID: 37312842 Free PMC article.
65 results